choderalab/openmmtools issues and pull requests

#606 - Adding major contributors

Pull Request - State: closed - Opened by ijpulidos over 2 years ago - 6 comments

#604 - extend on resume

Pull Request - State: open - Opened by jfennick over 2 years ago - 2 comments

#603 - Resuming and basic tests with MPI context

Issue - State: open - Opened by ijpulidos over 2 years ago - 2 comments

#598 - `openmm-ml` compatibility for generic `MultiStateSampler` objects

Pull Request - State: open - Opened by dominicrufa over 2 years ago - 1 comment

#595 - Renaming (or aliasing?) `online_analysis_interval`

Issue - State: open - Opened by ijpulidos over 2 years ago - 1 comment
Labels: :stars: enhancement, api-breaking

#594 - Test `MultiStateSampler._offline_analysis`

Issue - State: open - Opened by ijpulidos over 2 years ago
Labels: testing

#592 - Don't use online analysis to set offline analysis matrix dim

Issue - State: closed - Opened by mikemhenry over 2 years ago - 7 comments

#589 - added effective_length to MultiStateSamplerAnalyzer

Pull Request - State: open - Opened by richardjgowers over 2 years ago - 1 comment

#587 - fixes choderalab/openmmtools#579

Pull Request - State: closed - Opened by jfennick over 2 years ago

#584 - MultistateSampler - make iteration logging info level instead of debug?

Issue - State: closed - Opened by IAlibay over 2 years ago - 1 comment

#559 - Add RC check for openmm

Issue - State: closed - Opened by mikemhenry over 2 years ago - 1 comment
Labels: testing, :arrow_up: high-priority, low-effort

#557 - Enhance stability of minimization

Pull Request - State: open - Opened by jfennick over 2 years ago - 7 comments
Labels: :stars: enhancement, :arrow_up: high-priority

#556 - Add replica exchange attempts during equilibration phase

Pull Request - State: closed - Opened by jfennick over 2 years ago - 5 comments
Labels: :stars: enhancement, low-priority, low-effort

#555 - Added velocities to checkpoint file.

Pull Request - State: closed - Opened by jfennick over 2 years ago
Labels: :bug: bug, :arrow_up: high-priority

#544 - Add support for receptor dimers

Pull Request - State: open - Opened by jfennick almost 3 years ago - 8 comments
Labels: :stars: enhancement, :arrow_up: high-priority

#541 - Create nonequilibrium multi state sampler

Issue - State: open - Opened by zhang-ivy almost 3 years ago - 1 comment
Labels: :stars: enhancement, medium-priority, high-effort

#540 - Add gentle equilibration code

Issue - State: closed - Opened by zhang-ivy almost 3 years ago - 2 comments
Labels: :stars: enhancement, :arrow_up: high-priority

#516 - Multi-GPU Support for multistate runs

Issue - State: open - Opened by mpvenkatesh over 3 years ago - 5 comments

#484 - LangevinSplittingDynamicsMove sometimes nans

Issue - State: open - Opened by zhang-ivy about 4 years ago - 5 comments

Ecosyste.ms: Issues

GitHub / choderalab/openmmtools issues and pull requests