Ecosyste.ms: Issues

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GitHub / chembl/chembl_webresource_client issues and pull requests

#136 - upgrade requests_cache version

Pull Request - State: closed - Opened by eloyfelix 9 months ago

#134 - status 500 with chembl_webresource_client.new_client

Issue - State: open - Opened by jurgjn over 1 year ago

#133 - ChEMBL webresourse client issue

Issue - State: open - Opened by klimenko-od91 over 1 year ago

#132 - Updated README.md with addtional information

Pull Request - State: open - Opened by EricWang228 about 1 year ago

#131 - Error for url

Issue - State: open - Opened by RicardoMBorges over 1 year ago

#130 - confidence score

Issue - State: open - Opened by yufengwhy over 1 year ago

#129 - HttpApplicationError

Issue - State: closed - Opened by meghanakaranam1 over 1 year ago - 8 comments

#127 - Space between words of the query

Issue - State: open - Opened by Jameel9 over 1 year ago

#126 - Fixed

Issue - State: closed - Opened by fredhastedt over 1 year ago

#125 - Fail to import new_client due to API problem

Issue - State: closed - Opened by lpravda almost 2 years ago - 5 comments

#123 - Assay offsets and limit

Issue - State: closed - Opened by YojanaGadiya about 2 years ago - 2 comments

#122 - new_client is failing to import from chembl_webresource_client

Issue - State: open - Opened by parmidazamani about 2 years ago - 1 comment

#121 - Querying by inchi

Issue - State: closed - Opened by NadavQuris over 2 years ago

#120 - Http Application error

Issue - State: closed - Opened by YojanaGadiya over 2 years ago - 5 comments

#119 - Problem with unichem.structure

Issue - State: closed - Opened by sbgsbc over 2 years ago - 4 comments

#118 - Isomeric SMILES string

Issue - State: open - Opened by SHZ66 over 2 years ago

#117 - Mechanism results do not match what is on the website

Issue - State: closed - Opened by BartoszBartmanski over 2 years ago - 3 comments

#115 - Query hangs after reaching specific entry

Issue - State: open - Opened by ptourlas over 2 years ago - 1 comment

#114 - .filter for different names in "document_journal" column

Issue - State: closed - Opened by RicardoMBorges almost 3 years ago - 1 comment

#113 - Substructure Search Returning Error

Issue - State: closed - Opened by jessicastacey almost 3 years ago - 3 comments

#112 - Synonyms

Issue - State: open - Opened by RetrosynthesisAI almost 3 years ago

#111 - Getting canonical smiles directly

Issue - State: closed - Opened by ConstantinWaquet about 3 years ago - 1 comment

#110 - clean README, update jupyter notebook

Pull Request - State: closed - Opened by eloyfelix about 3 years ago

#109 - version information malformed

Issue - State: open - Opened by piechottam over 3 years ago - 1 comment

#108 - HttpApplicationError when downloading data from chembl document

Issue - State: closed - Opened by itssahil over 3 years ago - 1 comment

#107 - ctab23D is missing

Issue - State: closed - Opened by alexgcsa over 3 years ago - 1 comment

#106 - HttpBadRequest when using assay_type__iregex

Issue - State: closed - Opened by jonjoncardoso over 3 years ago - 3 comments

#105 - I can't access into chembl API

Issue - State: closed - Opened by TarapongSrisongkram over 3 years ago - 7 comments

#104 - Efficient query for protein target classification

Issue - State: open - Opened by BlakeList over 3 years ago

#103 - Target Predictions

Issue - State: closed - Opened by Agbeli over 3 years ago - 2 comments

#102 - get target image & smiles

Issue - State: closed - Opened by shahik over 3 years ago - 1 comment

#101 - New version of request_cache breaks the package

Issue - State: closed - Opened by stuchalk over 3 years ago - 1 comment

#100 - fix issue with requests-cache 0.6.0

Pull Request - State: closed - Opened by eloyfelix over 3 years ago

#98 - ImportError: cannot import name 'hashlib' from 'requests_cache.backends.base

Issue - State: closed - Opened by mayanrajesh over 3 years ago - 1 comment

#97 - Can't import new_client from chembl_webresource_client.new_client

Issue - State: closed - Opened by raysteven over 3 years ago - 2 comments

#96 - ImportError: cannot import name 'hashlib' from 'requests_cache.backends.base'

Issue - State: closed - Opened by gedeck over 3 years ago - 2 comments

#94 - Data dictionary for drug_type

Issue - State: open - Opened by sayonidas over 3 years ago

#93 - Searching molecules with inchikey produces large # of hits

Issue - State: open - Opened by stuchalk almost 4 years ago

#92 - Issues when searching list of molecules by name

Issue - State: open - Opened by gcolmenarejo almost 4 years ago

#91 - When loading DJango website issue with sqlite

Issue - State: open - Opened by stuchalk almost 4 years ago

#89 - Use list comprehension to simplify combination of multiple targets

Pull Request - State: closed - Opened by cthoyt over 4 years ago - 1 comment

#88 - Lookup compound by synonym - how does the code translate to chembl SQL queries ?

Issue - State: closed - Opened by joetym over 4 years ago - 2 comments

#86 - "Protein target classification" field

Issue - State: closed - Opened by ethanbass over 4 years ago

#85 - ID lookup - connection errors?

Issue - State: closed - Opened by sigven over 4 years ago - 1 comment

#84 - Py38

Pull Request - State: closed - Opened by eloyfelix over 4 years ago

#83 - fix #82

Pull Request - State: closed - Opened by eloyfelix over 4 years ago

#82 - bug in resource __getitem__ ignoring the current query

Issue - State: closed - Opened by juanfmx2 over 4 years ago - 1 comment

#81 - Retrieve all drugs that bind to a list of proteins

Issue - State: open - Opened by CryoSky over 4 years ago

#80 - TypeError: 'NoneType' object cannot be interpreted as an integer

Issue - State: closed - Opened by sorenwacker over 4 years ago - 1 comment

#78 - svg+xml is not an available format (['xml', 'json', 'yaml', 'svg', 'png'])

Issue - State: closed - Opened by zhangshd over 4 years ago - 3 comments

#77 - Max retries exceeded with url: /chembl/api/data/molecule/CHEMBL3990002

Issue - State: closed - Opened by Vanisri-Chepuri over 4 years ago - 1 comment

#76 - 'component_synonym' field does not support relations.

Issue - State: closed - Opened by sayonidas over 4 years ago - 4 comments

#74 - drop tests for deprecated functionality

Pull Request - State: closed - Opened by eloyfelix over 4 years ago

#73 - Check default format for svg+xml

Pull Request - State: closed - Opened by waltonseymour over 4 years ago - 1 comment

#72 - fix #71

Pull Request - State: closed - Opened by eloyfelix over 4 years ago

#71 - Importing `new_client` suddenly started to fail

Issue - State: closed - Opened by martin-sicho over 4 years ago - 12 comments

#70 - Metabolism information

Issue - State: closed - Opened by BartoszBartmanski almost 5 years ago - 4 comments

#69 - Fix splitting of bytes string and add format to /molecule/set/ query

Pull Request - State: closed - Opened by fredrikw about 5 years ago - 1 comment

#68 - Setting format doesn't work for batch molecule.get()

Issue - State: closed - Opened by fredrikw about 5 years ago

#67 - SSLError: HTTPSConnectionPool

Issue - State: open - Opened by andreanuzzo about 5 years ago - 1 comment

#66 - utility for preloading cache (feature request)

Issue - State: open - Opened by dkoes about 5 years ago

#65 - notebook

Pull Request - State: closed - Opened by eloyfelix about 5 years ago

#64 - clean

Pull Request - State: closed - Opened by eloyfelix about 5 years ago

#63 - update

Pull Request - State: closed - Opened by eloyfelix about 5 years ago

#62 - import and Conda install error

Issue - State: closed - Opened by zeromtmu about 5 years ago - 2 comments

#61 - Made code blocks in README.rst easier to read

Pull Request - State: closed - Opened by sshojiro over 5 years ago - 1 comment

#60 - read or write file using text mode instead of binary mode

Pull Request - State: closed - Opened by mlsoar over 5 years ago

#58 - Pickle error Python2/3 compatibility

Issue - State: closed - Opened by danielSoler93 over 5 years ago - 1 comment

#57 - Failed to generate MACCS fingerprints using utils.sdf2fps()

Issue - State: closed - Opened by paulahsan over 5 years ago - 1 comment

#56 - pip install fails (python 2.7.12)

Issue - State: closed - Opened by flc over 5 years ago - 1 comment

#55 - Extract ChEMBL version associated per compound

Issue - State: open - Opened by czodrowskilab over 5 years ago - 7 comments

#54 - How to extract all the activities measured for a protein

Issue - State: closed - Opened by wmmxk over 5 years ago - 3 comments

#52 - BaseException in import

Issue - State: closed - Opened by rajmunagajetti almost 6 years ago

#51 - Change variable name "async" to async_query; grequests import to first…

Pull Request - State: closed - Opened by Donkey1818 almost 6 years ago - 1 comment

#50 - Fixes issue #40 -- async keyword.

Pull Request - State: closed - Opened by dmyersturnbull almost 6 years ago - 1 comment

#49 - Queries take a long time.

Issue - State: closed - Opened by sorenwacker about 6 years ago

#48 - MaxRetryError

Issue - State: closed - Opened by wmmxk about 6 years ago - 5 comments

#47 - cannot access TargetResource

Issue - State: closed - Opened by zeromtmu about 6 years ago - 1 comment

#46 - Warnings generated with Python 3.6

Issue - State: closed - Opened by PatWalters over 6 years ago - 3 comments

#44 - Conda install on python 3.6 fails (pip works though)

Issue - State: closed - Opened by ankitvgupta over 6 years ago - 1 comment

#43 - Fixing Python 3.7 incompatibility with async keywords

Pull Request - State: closed - Opened by jmarinllao over 6 years ago - 5 comments

#42 - Make badges more prominent in README

Pull Request - State: closed - Opened by cthoyt over 6 years ago - 2 comments

#41 - Missing link to Travis-CI on home page

Issue - State: closed - Opened by cthoyt over 6 years ago - 4 comments

#40 - Not compatible with Python37 - async is now a keyword

Issue - State: closed - Opened by cthoyt over 6 years ago - 5 comments

#38 - cannot access

Issue - State: closed - Opened by zeromtmu over 6 years ago - 15 comments