Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / cdanielmachado/reframed issues and pull requests
#29 - Fixes on the last update
Pull Request -
State: open - Opened by lhtxa 4 months ago
#28 - Use `set()` instead of `[]` for `var_ids` in Solver
Issue -
State: open - Opened by Prunoideae 7 months ago
- 2 comments
#27 - itle: Difficulty Performing SteadyCom Analysis on Genome-Scale Community Model Created with CarveMe
Issue -
State: open - Opened by wtscott31 8 months ago
- 4 comments
#26 - Transcriptomics usage
Issue -
State: open - Opened by FelipeMelis 12 months ago
- 4 comments
#25 - Bug report: cannot import name 'compress' from 'scipy'
Issue -
State: closed - Opened by Hocnonsense about 1 year ago
- 2 comments
#24 - Adding reactions
Issue -
State: open - Opened by amarsh26 about 1 year ago
#23 - Fix io annotations
Pull Request -
State: closed - Opened by sulheim about 1 year ago
#22 - Parse XML Annotations
Pull Request -
State: closed - Opened by sulheim over 1 year ago
#21 - Annotations not properly parsed
Issue -
State: open - Opened by sulheim over 1 year ago
#20 - Question about loading models
Issue -
State: open - Opened by amarsh26 over 1 year ago
#19 - Update cplex_solver.py
Pull Request -
State: closed - Opened by rcolpo over 1 year ago
#18 - set_gpr_association does not remove genes
Issue -
State: open - Opened by IdunBurgos almost 2 years ago
#17 - questions about Environment class
Issue -
State: closed - Opened by amarsh26 almost 2 years ago
- 2 comments
#16 - Update package on PyPI
Issue -
State: open - Opened by yaccos over 2 years ago
#15 - Optlang solver edits
Pull Request -
State: closed - Opened by freiburgermsu over 2 years ago
- 1 comment
#14 - 'marge' function doesn't work when trying to repeat modeling in Shechter et al., 2021
Issue -
State: closed - Opened by Guan06 over 2 years ago
- 1 comment
#13 - Infeasible or Unbounded in reframed while solvable by cobrapy
Issue -
State: open - Opened by ccshao over 2 years ago
#12 - Provide sensible error handling for FVA when original problem is infeasible
Issue -
State: open - Opened by yaccos almost 3 years ago
#11 - Solver disregards previous set objectives
Issue -
State: open - Opened by yaccos almost 3 years ago
#10 - `solver_instance()` should keep the objective from the parent model
Issue -
State: open - Opened by yaccos almost 3 years ago
#9 - Declare `reframed.solvers.solver.Solver` an abstract base class
Issue -
State: open - Opened by yaccos almost 3 years ago
- 1 comment
#8 - Having class `Status` in top-level API would be useful
Issue -
State: open - Opened by yaccos almost 3 years ago
- 3 comments
#7 - Fix Iterable imports in all places.
Pull Request -
State: closed - Opened by sirno about 3 years ago
- 1 comment
#6 - Import Iterable from collections.abc
Pull Request -
State: closed - Opened by sirno about 3 years ago
- 1 comment
#5 - essential_genes and essential_reactions extra arguments and outputs
Issue -
State: open - Opened by EmanuelGoncalves about 3 years ago
#4 - load gene annotations in load_cbmodel()
Issue -
State: open - Opened by EmanuelGoncalves about 3 years ago
#3 - Check for fbc plugin
Issue -
State: closed - Opened by JosuaCarl about 3 years ago
- 2 comments
#2 - Models not growing anymore after update
Issue -
State: closed - Opened by silvtal almost 4 years ago
- 1 comment
#1 - Objective is none
Issue -
State: closed - Opened by pbelmann almost 4 years ago
- 3 comments