Ecosyste.ms: Issues

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GitHub / cbg-ethz/compass issues and pull requests

#19 - compass installation

Issue - State: closed - Opened by kjpg 3 months ago - 1 comment

#18 - Running compass with data from multiple samples

Issue - State: open - Opened by johan-gson 3 months ago - 2 comments

#17 - Getting Segmentation Fault while running COMPASS with CNA

Issue - State: open - Opened by priyadhiman007 4 months ago - 3 comments

#16 - Questions about focal and broad CNVs

Issue - State: open - Opened by andreyurch 6 months ago - 5 comments

#15 - Compilation on M3 processors

Issue - State: closed - Opened by andreyurch 6 months ago - 11 comments

#14 - Use Compass data with protein data

Issue - State: open - Opened by BenjaminPLille 9 months ago - 1 comment

#13 - Handling computed copy numbers with spike-ins

Issue - State: open - Opened by LukaP-BB 11 months ago - 2 comments

#12 - Detecting CNA gains supported by germline SNPs

Issue - State: closed - Opened by murphycj about 1 year ago - 3 comments

#11 - CNA with chromosomes/chromosome arms

Issue - State: closed - Opened by sofiedemeyer about 1 year ago - 2 comments

#10 - Add parameter for random seed

Issue - State: closed - Opened by murphycj over 1 year ago - 4 comments

#9 - Can you expose more parameters?

Issue - State: closed - Opened by murphycj over 1 year ago - 2 comments

#8 - Revision

Pull Request - State: closed - Opened by e-sollier over 1 year ago

#7 - Is it possible to annotate cells?

Issue - State: closed - Opened by RaphaelHablesreiter almost 2 years ago - 4 comments

#6 - Is this compatible with time series data?

Issue - State: closed - Opened by murphycj almost 2 years ago - 2 comments

#5 - ModuleNotFoundError: No module named 'pyensembl.biotypes'

Issue - State: closed - Opened by reJELIN almost 2 years ago

#4 - Multiple questions about the preprocess script

Issue - State: closed - Opened by reJELIN about 2 years ago - 7 comments

#3 - terminate called after throwing an instance of 'std::out_of_range'

Issue - State: closed - Opened by reJELIN about 2 years ago - 4 comments

#2 - Add CI/CD and Docker image.

Pull Request - State: closed - Opened by murphycj about 2 years ago - 1 comment

#2 - Add CI/CD and Docker image.

Pull Request - State: closed - Opened by murphycj about 2 years ago - 1 comment

#1 - Report per-cell clone assignments?

Issue - State: closed - Opened by murphycj about 2 years ago - 4 comments