Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / catalystneuro/fee-lab-to-nwb issues and pull requests

#71 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago

#70 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago

#69 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 9 months ago

#68 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 10 months ago

#67 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 11 months ago

#66 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 11 months ago

#65 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 11 months ago

#64 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 12 months ago

#63 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago

#62 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago

#61 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#60 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#59 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago

#58 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago

#57 - Bump version to 1.1.0

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#56 - Update requirements.txt

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#55 - Override `get_image_masks` from custom extractor

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#54 - Add custom widget for hierarchical data visualisation with sound

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#53 - Switch to `AudioInterface` from NeuroConv

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago - 1 comment

#52 - Bump `neuroconv` version

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#51 - Switch to `VideoInterface`

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#50 - Run conversions from fresh environment

Issue - State: closed - Opened by weiglszonja almost 2 years ago - 8 comments

#49 - Remove key pops from `get_metadata_schema` in `AudioInterface`

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago - 1 comment

#48 - Add note about conversion

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#47 - Add package version pins

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#46 - Rename files

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#45 - Get motif syllables mapping from Neuropixels_Dataset_Log.xlsx

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#44 - Process Neuropixels Dataset Log.xlsx (needed for #34)

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago - 1 comment

#43 - Align `session_start_time` to the first timestamp from the imaging recording

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago

#42 - Write EXTRACT segmentation configurations to NWB file

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago - 1 comment

#41 - Changelog detector

Pull Request - State: closed - Opened by CodyCBakerPhD almost 2 years ago - 1 comment

#40 - Adjust timestamps for behavior video

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago - 2 comments

#39 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago

#38 - Showcasing auto-changelog

Pull Request - State: closed - Opened by weiglszonja almost 2 years ago - 8 comments

#37 - Add audio as stimulus to the NWB file

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 3 comments

#36 - add CHANGELOG.md

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 1 comment

#35 - Add CHANGELOG.md

Issue - State: closed - Opened by weiglszonja about 2 years ago

#34 - Create a hierarchical table for syllables and motifs

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 3 comments

#33 - Synchronise motif timestamps from `syncData.mat`

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 3 comments

#32 - Final To-Do's

Issue - State: closed - Opened by CodyCBakerPhD about 2 years ago - 1 comment

#31 - Release first version

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 2 comments

#30 - Update `README.md` with project structure

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#29 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago

#28 - Add custom segmentation interface with timestamps

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#27 - Fix import `fee_lab_to_nwb`

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#26 - Fixes for latest NeuroConv

Pull Request - State: closed - Opened by CodyCBakerPhD about 2 years ago - 1 comment
Labels: bug

#25 - Integrate audiointerface into ecephys pipeline

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#24 - Add MotifInterface

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#23 - Add motif interface

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#22 - Draft notes for `.mat` files from `ephys` folder

Issue - State: closed - Opened by weiglszonja about 2 years ago - 1 comment

#21 - Add `ecephys` pipeline

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#20 - Add custom data interface for audio

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 7 comments

#19 - Add `get_video` to ScherrerOphysImagingExtractor

Pull Request - State: closed - Opened by weiglszonja about 2 years ago - 1 comment

#18 - Change imports to `neuroconv`

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#17 - Fix image shape mismatch in `ScherrerOphysImagingExtractor`

Pull Request - State: closed - Opened by weiglszonja about 2 years ago

#16 - Image size mismatch with ScherrerOphysImagingExtractor

Issue - State: closed - Opened by weiglszonja about 2 years ago - 1 comment

#15 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago

#14 - Convert imaging data

Pull Request - State: closed - Opened by weiglszonja over 2 years ago

#13 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 2 years ago

#12 - Fill NWB metadata

Pull Request - State: closed - Opened by weiglszonja over 2 years ago - 1 comment

#11 - Add custom ImagingExtractor for ophys data

Pull Request - State: closed - Opened by weiglszonja over 2 years ago - 6 comments

#10 - Testing pre-commit

Pull Request - State: closed - Opened by CodyCBakerPhD over 2 years ago

#9 - Fill metadata

Pull Request - State: closed - Opened by weiglszonja over 2 years ago - 1 comment

#8 - Make package pip installable

Pull Request - State: closed - Opened by weiglszonja over 2 years ago - 1 comment

#7 - Process behavioral data

Pull Request - State: closed - Opened by weiglszonja over 2 years ago - 6 comments

#6 - [ToDo]: collect metadata info from Fee lab

Issue - State: closed - Opened by weiglszonja over 2 years ago - 1 comment

#5 - [ToDo]: name setup.py and make package pip installable

Issue - State: closed - Opened by CodyCBakerPhD over 2 years ago

#4 - Setup folder structure for ophys conversion

Pull Request - State: closed - Opened by weiglszonja over 2 years ago

#3 - [ToDo]: add behavior interface for ophys

Issue - State: closed - Opened by CodyCBakerPhD over 2 years ago - 2 comments

#2 - [ToDo]: write custom ImagingExtractor for ophys raw data

Issue - State: closed - Opened by CodyCBakerPhD over 2 years ago

#1 - [ToDo]: setup ophys folder

Issue - State: closed - Opened by CodyCBakerPhD over 2 years ago