Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / caracal-pipeline/stimela issues and pull requests

#196 - stimela stalled on crosby?

Issue - State: closed - Opened by ktrehaeven 11 months ago - 3 comments

#195 - balooning RAM usage when running a long for-loop

Issue - State: open - Opened by o-smirnov 11 months ago - 2 comments
Labels: bug

#193 - EKS volume node affinity conflicts

Issue - State: closed - Opened by o-smirnov 12 months ago - 1 comment

#191 - Support multiple config files via CLI

Issue - State: open - Opened by JSKenyon about 1 year ago

#190 - Support substitutions in backend config

Issue - State: open - Opened by JSKenyon about 1 year ago

#189 - add binding of directories above current one to singularity

Issue - State: open - Opened by o-smirnov about 1 year ago
Labels: bug

#188 - k8s error events cause unseemly stack traces

Issue - State: closed - Opened by o-smirnov about 1 year ago
Labels: enhancement

#187 - docker inspect timestamp not parsed

Issue - State: open - Opened by o-smirnov about 1 year ago
Labels: bug

#186 - Very minor fix for strings which don't include a space.

Pull Request - State: closed - Opened by JSKenyon about 1 year ago

#185 - Minor fixes for kube backend.

Pull Request - State: closed - Opened by JSKenyon about 1 year ago

#184 - add cleanup code for daskjob, daskworkergroup and daskclusters

Issue - State: open - Opened by o-smirnov about 1 year ago - 1 comment

#183 - Singularity images pull with stimela2

Issue - State: open - Opened by viralp about 1 year ago

#182 - Propagate imagePullPolicy for worker pods

Pull Request - State: open - Opened by landmanbester about 1 year ago - 2 comments

#180 - add _include_post statement

Issue - State: closed - Opened by o-smirnov about 1 year ago - 1 comment

#179 - inject user information into container

Issue - State: closed - Opened by o-smirnov about 1 year ago - 2 comments

#178 - add auto-cleanup of inactive dynamically allocated temporary storage

Issue - State: open - Opened by o-smirnov about 1 year ago
Labels: enhancement

#177 - add caching of non-File type results

Issue - State: open - Opened by o-smirnov about 1 year ago
Labels: enhancement

#176 - detect failure modes in Kubernetes backend and bomb out

Issue - State: closed - Opened by o-smirnov about 1 year ago - 8 comments

#175 - add --boring option to disable progress bar

Issue - State: closed - Opened by o-smirnov about 1 year ago - 1 comment

#174 - Issue 169

Pull Request - State: closed - Opened by o-smirnov about 1 year ago

#173 - [optionally] cleanup running k8s pods at entry or exit

Issue - State: closed - Opened by o-smirnov about 1 year ago - 1 comment

#172 - FIASCO III: Kubernetes backend functional

Pull Request - State: closed - Opened by o-smirnov about 1 year ago - 3 comments

#171 - iterable parameter values not passed correctly into the command-line

Issue - State: open - Opened by Allycan about 1 year ago - 4 comments

#170 - misleading prevalidation error message when a substitution is unknown

Issue - State: closed - Opened by o-smirnov about 1 year ago - 1 comment
Labels: enhancement

#169 - Add support for pre-built singularity images

Issue - State: open - Opened by o-smirnov about 1 year ago - 3 comments
Labels: enhancement

#168 - Stimela not recognising singularity images

Issue - State: closed - Opened by Allycan about 1 year ago - 3 comments

#167 - how to provision temporary storage to a recipe

Issue - State: closed - Opened by o-smirnov about 1 year ago - 1 comment
Labels: enhancement

#166 - Add SORT function to stimela

Issue - State: closed - Opened by Victoria-Samboco over 1 year ago - 4 comments
Labels: enhancement

#165 - add port forwarding to kube backend

Issue - State: closed - Opened by o-smirnov over 1 year ago - 1 comment
Labels: enhancement

#164 - Submit dask job stuff

Pull Request - State: closed - Opened by sjperkins over 1 year ago

#163 - report CPU/memory/etc metrics from kube backend

Issue - State: open - Opened by o-smirnov over 1 year ago - 5 comments
Labels: enhancement

#159 - Singularize

Pull Request - State: closed - Opened by o-smirnov over 1 year ago - 1 comment

#157 - Pre-validation error in stimela 2.0rc4 for keyword 'UNSET'

Issue - State: closed - Opened by Victoria-Samboco over 1 year ago - 3 comments

#156 - Stimela without user

Issue - State: closed - Opened by NicolaMalavasi over 1 year ago - 3 comments

#154 - Singularize!

Pull Request - State: closed - Opened by o-smirnov over 1 year ago - 2 comments

#153 - Formulas don't seem to work in List[str]

Issue - State: open - Opened by senkhxsi over 1 year ago - 1 comment

#152 - Option to select single item from list

Issue - State: open - Opened by Mulan-94 over 1 year ago

#151 - A destruction of CARACal

Issue - State: open - Opened by SpheMakh over 1 year ago

#150 - Issue 140

Pull Request - State: closed - Opened by SpheMakh over 1 year ago

#145 - fixes #144

Pull Request - State: closed - Opened by o-smirnov over 1 year ago - 1 comment

#144 - github actions fail with WheelFileValidationError

Issue - State: closed - Opened by o-smirnov over 1 year ago

#142 - Some docs better than no docs at all

Pull Request - State: closed - Opened by o-smirnov over 1 year ago

#140 - CASA flavour syntax error

Issue - State: closed - Opened by senkhxsi over 1 year ago - 3 comments

#139 - AttributeError: module 'stimela' has no attribute 'is_logger_initialized'

Issue - State: closed - Opened by Kincaidr over 1 year ago - 2 comments

#138 - stimela help command is confusing

Issue - State: closed - Opened by o-smirnov over 1 year ago - 1 comment
Labels: enhancement

#137 - Separator is not found error after running a step

Issue - State: closed - Opened by landmanbester over 1 year ago - 6 comments

#136 - "Field names must not be keywords: 'continue'"

Issue - State: open - Opened by o-smirnov over 1 year ago
Labels: bug

#134 - add shorthand schema option

Issue - State: closed - Opened by o-smirnov almost 2 years ago - 2 comments
Labels: enhancement

#133 - assigning var==UNSET from command line leads to infinite loop at startup

Issue - State: closed - Opened by o-smirnov almost 2 years ago - 1 comment

#132 - add top-level default-recipe key

Issue - State: closed - Opened by o-smirnov almost 2 years ago - 1 comment

#131 - fixes #126. Fixes #129. Fixes #130. Fixes #125. Fixed #116.

Pull Request - State: closed - Opened by o-smirnov almost 2 years ago

#130 - allow PARSE_OUTPUT wrangler to specify regex group name explicitly

Issue - State: closed - Opened by o-smirnov almost 2 years ago
Labels: enhancement

#129 - better status display for for-loops

Issue - State: closed - Opened by o-smirnov almost 2 years ago
Labels: enhancement

#127 - allow a "gentle" Ctrl+C interrupt

Issue - State: open - Opened by o-smirnov almost 2 years ago
Labels: enhancement

#124 - stringify list items for casa-task flavour cabs

Pull Request - State: closed - Opened by landmanbester almost 2 years ago

#123 - Convert lists of unicode to str for casa-task flavour cabs

Issue - State: closed - Opened by landmanbester almost 2 years ago - 1 comment

#122 - add Xvfb launch to runtime

Issue - State: closed - Opened by o-smirnov almost 2 years ago - 9 comments

#121 - Stimela considers out of date MeasTables as errors

Issue - State: open - Opened by landmanbester almost 2 years ago - 3 comments

#120 - What If I want to use a commandline debugger for dev?

Pull Request - State: closed - Opened by Mulan-94 almost 2 years ago - 6 comments

#118 - allow selection of sub-recipe steps

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#117 - Parsing in multiple MS's

Issue - State: closed - Opened by Kincaidr almost 2 years ago - 8 comments

#116 - add option to skip a step if all outputs already exist

Issue - State: closed - Opened by o-smirnov almost 2 years ago - 1 comment

#115 - add pip option to cabs?

Issue - State: open - Opened by o-smirnov almost 2 years ago
Labels: enhancement

#114 - delay creation of log directories

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#113 - allow "wildcard" substitutions of the form steps.image-*.prefix

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#112 - Issue 110

Pull Request - State: closed - Opened by o-smirnov almost 2 years ago

#111 - omit skipped steps from profiling display

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#110 - support "stimela run step.parameter=value"

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#109 - Issue 108

Pull Request - State: closed - Opened by o-smirnov almost 2 years ago

#105 - Fixes #102. Fixes #103. Fixes #104.

Pull Request - State: closed - Opened by o-smirnov almost 2 years ago

#104 - add opts.rlimits support

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#103 - hitting command-line argument length limit for large dicts

Issue - State: closed - Opened by o-smirnov almost 2 years ago
Labels: enhancement

#102 - add a HIGHLIGHT wrangler to apply a text style to a section of cab output

Issue - State: closed - Opened by o-smirnov almost 2 years ago
Labels: enhancement

#100 - fixes #99. Fixes some breakage induced by #96

Pull Request - State: closed - Opened by o-smirnov almost 2 years ago

#99 - Dynamic schema needs to be evaluated at prevalidation already

Issue - State: closed - Opened by o-smirnov almost 2 years ago

#98 - Fix unset problem in clickify parameters.

Pull Request - State: closed - Opened by JSKenyon almost 2 years ago

#97 - Make schema utils compatible with changes to unset variables.

Pull Request - State: closed - Opened by JSKenyon almost 2 years ago - 1 comment

#96 - Cmdline keyval

Pull Request - State: closed - Opened by SpheMakh almost 2 years ago

#95 - fixes #83. Silly CASA python2isms

Pull Request - State: closed - Opened by o-smirnov almost 2 years ago

#93 - allow key=value command-line options

Pull Request - State: closed - Opened by SpheMakh about 2 years ago

#92 - add key=value option for command-line parser

Pull Request - State: closed - Opened by SpheMakh about 2 years ago - 2 comments

#91 - Cleaned up & simplified & prettified logging machinery

Pull Request - State: closed - Opened by o-smirnov about 2 years ago - 1 comment

#90 - Absorbing CASA

Pull Request - State: closed - Opened by o-smirnov about 2 years ago

#89 - Issue 82: inline python etc. etc.

Pull Request - State: closed - Opened by o-smirnov about 2 years ago

#88 - Wrangler update, can parse outputs

Pull Request - State: closed - Opened by o-smirnov about 2 years ago - 1 comment

#87 - Improve test coverage

Issue - State: open - Opened by landmanbester about 2 years ago - 1 comment
Labels: enhancement

#86 - add include='scabha' to .toml file

Pull Request - State: closed - Opened by landmanbester about 2 years ago