capsid/capsid issues and pull requests

#45 - Error and Traceback given when starting capsid from the Command Promt

Issue - State: closed - Opened by MediQ-Itay over 9 years ago - 2 comments

#44 - pymongo connection deprecated - error in capsid

Issue - State: closed - Opened by rspreafico almost 10 years ago

#43 - Simulated dataset no longer available

Issue - State: closed - Opened by pfaucon over 10 years ago

#42 - problem outputting unmapped reads with capsid

Issue - State: closed - Opened by shanewilson almost 12 years ago - 1 comment
Labels: Defect, Pipeline

#41 - OperationFailure: cursor id not valid at server

Issue - State: closed - Opened by shanewilson over 12 years ago - 1 comment
Labels: Defect, Pipeline

#40 - Set your password on first login

Issue - State: open - Opened by shanewilson over 12 years ago
Labels: New Feature, Web Application

#39 - Admin reset passwords

Issue - State: open - Opened by shanewilson over 12 years ago
Labels: New Feature, Web Application

#38 - Allow users to edit password

Issue - State: open - Opened by shanewilson over 12 years ago
Labels: New Feature, Web Application

#37 - Server-side calls for 'big data' tables

Issue - State: closed - Opened by shanewilson almost 13 years ago
Labels: Improvement, Web Application

#36 - Statistics updating genomes blocks db

Issue - State: closed - Opened by shanewilson almost 13 years ago - 2 comments
Labels: Defect, Improvement, Pipeline

#35 - Output file breaks when using file paths

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Pipeline

#34 - Error when intersecting files

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Pipeline

#33 - Run over https

Issue - State: closed - Opened by shanewilson almost 13 years ago - 2 comments
Labels: New Feature, Web Application

#32 - Highlight the selected read in the Contig

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#31 - When creating a new user selecting 'use LDAP' doesn't stop the email

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#30 - Sample nav item has rounded corners when not logged in as Admin

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#29 - Generate the contig sequence for a mapped read

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: New Feature, Web Application

#28 - Add a new field in mapped for the opt('AS') tag

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Pipeline

#27 - Make Genes a top level category

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: New Feature, Web Application, Pipeline

#26 - Use cigar data rather than JAligner for alignment

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: New Feature, Web Application

#25 - Show total rows in each table

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#24 - Add sample doesn't work on sample list

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#23 - Edit Alignment button doesn't work

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#22 - Instead of recalculating max gene coverage for project, use the max sample coverage

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Pipeline

#21 - Genomes no longer display features

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#20 - Add how many times a given genome is hit on the project by project basis

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#19 - Add a section to the Tutorial about setting access privileges for a given project

Issue - State: closed - Opened by shanewilson almost 13 years ago - 2 comments
Labels: Wiki

#18 - Change default tab in Show Mapped to Alignment

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#17 - Add a column for number of samples to project list

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#16 - More descriptive titles

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#15 - Add Cancel button to all the Edit pages

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#14 - Link mapped genes to NCBI page

Issue - State: closed - Opened by shanewilson almost 13 years ago - 2 comments
Labels: New Feature, Web Application, Pipeline

#13 - Add User popup formatting is broken

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#12 - Upgrade to Grails 2.0

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: New Feature, Web Application

#11 - Upgrade to Dojo 1.7

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: New Feature, Web Application

#10 - Subtraction not filtering out unmapped when building mapped reads

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Pipeline

#9 - Alignment positions do not match up

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#8 - Open new tab when clicking on a read in JBrowse

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#7 - Link to genome page from genome/project page

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Improvement, Web Application

#6 - Work around failed requests from jbrowse

Issue - State: open - Opened by shanewilson almost 13 years ago
Labels: Defect, Web Application

#5 - Exceptions from show_reads_data

Issue - State: open - Opened by shanewilson almost 13 years ago
Labels: Defect, Web Application

#4 - Edit User button mislabelled and broken

Issue - State: closed - Opened by shanewilson almost 13 years ago
Labels: Defect, Web Application

#3 - Sample page does not show cancer type

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#2 - Edit Project page returns a 404

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

#1 - Add User form doesn't work

Issue - State: closed - Opened by shanewilson almost 13 years ago - 1 comment
Labels: Defect, Web Application

GitHub / capsid/capsid issues and pull requests