Ecosyste.ms: Issues

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GitHub / bsmith89/StrainFacts issues and pull requests

#15 - Questions about TSV input format

Issue - State: open - Opened by Nautilus96 11 months ago - 3 comments

#14 - Subsampling sites and other considerations for faster fitting

Issue - State: closed - Opened by elsherbini about 1 year ago - 4 comments

#13 - Interpreting the genotype output

Issue - State: closed - Opened by ajverster over 1 year ago - 1 comment

#12 - Prevalence filtering question

Issue - State: closed - Opened by gavinmdouglas over 1 year ago - 2 comments

#11 - Running model evaluations for non simulation data

Issue - State: open - Opened by elximo over 1 year ago - 2 comments

#10 - Added conda env yaml, github ci, and devcontainer

Pull Request - State: closed - Opened by nick-youngblut almost 2 years ago - 3 comments

#9 - bioconda recipe or pypi release?

Issue - State: closed - Opened by nick-youngblut almost 2 years ago - 4 comments

#6 - Refine import/export TSV formats

Issue - State: open - Opened by bsmith89 almost 2 years ago

#5 - Improve documentation of input formats

Issue - State: open - Opened by SilasK over 2 years ago - 6 comments

#4 - Use Genotypes generated in a discovery set to deconvolute new metagenomes

Issue - State: open - Opened by sergioSEa over 2 years ago - 1 comment

#3 - How to perform model selection?

Issue - State: closed - Opened by gavinmdouglas over 2 years ago - 4 comments

#2 - Improper error handling when num strains == 1

Issue - State: closed - Opened by gavinmdouglas over 2 years ago - 2 comments

#1 - Pytorch package not found

Issue - State: closed - Opened by gavinmdouglas over 2 years ago - 2 comments