Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / broadinstitute/lincs-profiling-complementarity issues and pull requests

#79 - Adding pdf of full figure 1

Pull Request - State: closed - Opened by gwaybio over 2 years ago

#79 - Adding pdf of full figure 1

Pull Request - State: closed - Opened by gwaybio over 2 years ago

#78 - Save correct table for deep learning precision

Pull Request - State: closed - Opened by gwaybio over 2 years ago

#78 - Save correct table for deep learning precision

Pull Request - State: closed - Opened by gwaybio over 2 years ago

#77 - Adding `All*` to Fig S17

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#77 - Adding `All*` to Fig S17

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#76 - Adding full figure + update repo

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#76 - Adding full figure + update repo

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#75 - [Response to Reviewers] Update all figure names

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#75 - [Response to Reviewers] Update all figure names

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#74 - [Response to Review] Update Figure 5 (Deep learning analysis)

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#74 - [Response to Review] Update Figure 5 (Deep learning analysis)

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#73 - [Response to Reviewers] Update Figure 4F - ORA GO term display

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#73 - [Response to Reviewers] Update Figure 4F - ORA GO term display

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#72 - [Response to Review] Equal weighting ensemble

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#72 - [Response to Review] Equal weighting ensemble

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#71 - Do not track all csv files via git lfs

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#71 - Do not track all csv files via git lfs

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#70 - [Response to Reviewers] Update supplementary tables

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#70 - [Response to Reviewers] Update supplementary tables

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#67 - [Response to Review] Filter GO terms for ML analysis

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#67 - [Response to Review] Filter GO terms for ML analysis

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#65 - [Response to Review] Edge well filter QC percent strong

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#65 - [Response to Review] Edge well filter QC percent strong

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#62 - [Response to Review] Adding precision analysis for MOAs and Targets

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#62 - [Response to Review] Adding precision analysis for MOAs and Targets

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#61 - [Response to Review] Update MOA labels in UMAP visualization

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#61 - [Response to Review] Update MOA labels in UMAP visualization

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#60 - Expanded prediction analysis

Issue - State: open - Opened by gwaybio almost 3 years ago - 3 comments

#60 - Expanded prediction analysis

Issue - State: open - Opened by gwaybio almost 3 years ago - 3 comments

#59 - [Response to Review] Add target and pathway labels for prediction

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#59 - [Response to Review] Add target and pathway labels for prediction

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#57 - [Response to Review] Discretize panels in figure 1 and sup fig 3

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#57 - [Response to Review] Discretize panels in figure 1 and sup fig 3

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#56 - [Response to Review] Adding dose independent null distribution comparisons

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#56 - [Response to Review] Adding dose independent null distribution comparisons

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#55 - [Response to Review] Coefficient of variation supplementary figure

Pull Request - State: closed - Opened by gwaybio almost 3 years ago - 1 comment

#55 - [Response to Review] Coefficient of variation supplementary figure

Pull Request - State: closed - Opened by gwaybio almost 3 years ago - 1 comment

#54 - [Response to Review] Add PCA supplementary figure

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#54 - [Response to Review] Add PCA supplementary figure

Pull Request - State: closed - Opened by gwaybio almost 3 years ago

#53 - scikit-learn package version

Issue - State: open - Opened by yhan8 almost 3 years ago

#53 - scikit-learn package version

Issue - State: open - Opened by yhan8 almost 3 years ago

#52 - MOA predictions figure tweaking

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#52 - MOA predictions figure tweaking

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#50 - Remove bortezomib from analysis

Issue - State: open - Opened by gwaybio over 3 years ago - 2 comments

#50 - Remove bortezomib from analysis

Issue - State: open - Opened by gwaybio over 3 years ago - 2 comments

#49 - Sync performance metrics after subsampling analysis

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#49 - Sync performance metrics after subsampling analysis

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#48 - Adjust calculating percent matching

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#48 - Adjust calculating percent matching

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#47 - update fig 5 and add sup fig 10

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#47 - update fig 5 and add sup fig 10

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#46 - Finalize MOA models

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#46 - Finalize MOA models

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#45 - Update subsampling procedure

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#45 - Update subsampling procedure

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#43 - Modernize figures (update names)

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#43 - Modernize figures (update names)

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#42 - Adding data in preparation for final MOA prediction

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#42 - Adding data in preparation for final MOA prediction

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#41 - Misc edits to data exploration

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#41 - Misc edits to data exploration

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#40 - Future work

Issue - State: open - Opened by shntnu over 3 years ago - 2 comments

#40 - Future work

Issue - State: open - Opened by shntnu over 3 years ago - 2 comments

#39 - Update README.md

Pull Request - State: closed - Opened by shntnu over 3 years ago

#39 - Update README.md

Pull Request - State: closed - Opened by shntnu over 3 years ago

#38 - Updating heatmap colors

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#38 - Updating heatmap colors

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#37 - Rerun MOA prediction including subsampled CP data

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#37 - Rerun MOA prediction including subsampled CP data

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#36 - Rerun clustering pipeline and generate sup fig 7

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#36 - Rerun clustering pipeline and generate sup fig 7

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#35 - Adding plate position analysis and figures

Pull Request - State: closed - Opened by gwaybio over 3 years ago - 2 comments

#35 - Adding plate position analysis and figures

Pull Request - State: closed - Opened by gwaybio over 3 years ago - 2 comments

#34 - Update consensus analysis for spherized consensus profiles

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#34 - Update consensus analysis for spherized consensus profiles

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#33 - Adding supplementary figure 6

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#33 - Adding supplementary figure 6

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#32 - Adding supplementary figure 5 - UMAP by dose and TSNE

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#32 - Adding supplementary figure 5 - UMAP by dose and TSNE

Pull Request - State: closed - Opened by gwaybio over 3 years ago

#31 - Reorgnaize figure 1 and 2

Pull Request - State: closed - Opened by gwaybio over 3 years ago - 1 comment

#31 - Reorgnaize figure 1 and 2

Pull Request - State: closed - Opened by gwaybio over 3 years ago - 1 comment