broadinstitute/genetic-prevalence-estimator issues and pull requests

#100 - Add configuration file with data URLs

Issue - State: open - Opened by nawatts over 2 years ago
Labels: Component: data pipelines, Component: worker

#100 - Add configuration file with data URLs

Issue - State: open - Opened by nawatts over 2 years ago
Labels: Component: data pipelines, Component: worker

#99 - Support tablet screen size

Issue - State: closed - Opened by nawatts over 2 years ago - 1 comment
Labels: Component: frontend

#98 - Support gnomAD SVs in custom variant lists

Issue - State: closed - Opened by nawatts over 2 years ago - 2 comments
Labels: Component: data pipelines, Component: worker, Component: frontend, High priority

#98 - Support gnomAD SVs in custom variant lists

Issue - State: closed - Opened by nawatts over 2 years ago - 2 comments
Labels: Component: data pipelines, Component: worker, Component: frontend, High priority

#97 - Elaborate on tooltip for filtered variants

Issue - State: closed - Opened by nawatts over 2 years ago - 1 comment
Labels: Component: data pipelines, Component: worker, Component: frontend

#97 - Elaborate on tooltip for filtered variants

Issue - State: closed - Opened by nawatts over 2 years ago - 1 comment
Labels: Component: data pipelines, Component: worker, Component: frontend

#96 - Hide filtered variants by default

Issue - State: closed - Opened by sambaxter over 2 years ago - 4 comments
Labels: Component: frontend

#96 - Hide filtered variants by default

Issue - State: closed - Opened by sambaxter over 2 years ago - 4 comments
Labels: Component: frontend

#95 - Allow users to add additional variants to list after calculations

Issue - State: closed - Opened by sambaxter over 2 years ago - 3 comments
Labels: Component: website, Component: worker, Component: frontend, High priority

#95 - Allow users to add additional variants to list after calculations

Issue - State: closed - Opened by sambaxter over 2 years ago - 3 comments
Labels: Component: website, Component: worker, Component: frontend, High priority

#94 - Add tests for worker

Issue - State: open - Opened by nawatts over 2 years ago - 1 comment
Labels: Component: worker

#94 - Add tests for worker

Issue - State: open - Opened by nawatts over 2 years ago - 1 comment
Labels: Component: worker

#93 - Display gene/transcript in variant table

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: data pipelines, Component: worker, Component: frontend

#93 - Display gene/transcript in variant table

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: data pipelines, Component: worker, Component: frontend

#92 - Store gene symbol with variant lists

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: website, Component: frontend

#92 - Store gene symbol with variant lists

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: website, Component: frontend

#91 - Add activity log for variant lists

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: website, Component: frontend

#91 - Add activity log for variant lists

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: website, Component: frontend

#90 - Add variant-level notes

Issue - State: closed - Opened by nawatts almost 3 years ago - 1 comment
Labels: Component: website, Component: frontend, High priority

#90 - Add variant-level notes

Issue - State: closed - Opened by nawatts almost 3 years ago - 1 comment
Labels: Component: website, Component: frontend, High priority

#89 - Save which variants are selected in a variant list

Issue - State: closed - Opened by nawatts almost 3 years ago - 4 comments
Labels: Component: website, Component: frontend, High priority

#89 - Save which variants are selected in a variant list

Issue - State: closed - Opened by nawatts almost 3 years ago - 4 comments
Labels: Component: website, Component: frontend, High priority

#88 - Remove dependency on gnomAD browser API

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: website, Component: data pipelines, High priority

#88 - Remove dependency on gnomAD browser API

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: website, Component: data pipelines, High priority

#87 - Switch Cloud Build triggers to manual triggers

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: infrastructure

#87 - Switch Cloud Build triggers to manual triggers

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: infrastructure

#86 - Adding star status to ClinVar classification

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: data pipelines, Component: frontend

#86 - Adding star status to ClinVar classification

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: data pipelines, Component: frontend

#85 - "Included from" column blank

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Bug, Component: frontend

#85 - "Included from" column blank

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Bug, Component: frontend

#84 - Conflicting levels of pathogenicity pulling more than it should

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Bug, Component: data pipelines, Component: worker, High priority

#84 - Conflicting levels of pathogenicity pulling more than it should

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Bug, Component: data pipelines, Component: worker, High priority

#83 - Add Allele frequency to download

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#83 - Add Allele frequency to download

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#82 - Being able to change/save variant lists after creation

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Component: website, Component: worker, Component: frontend

#82 - Being able to change/save variant lists after creation

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Component: website, Component: worker, Component: frontend

#81 - Including subcontinental ancestries

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Component: data pipelines, High priority

#81 - Including subcontinental ancestries

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Component: data pipelines, High priority

#80 - Changing label for “scientific”

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#80 - Changing label for “scientific”

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#79 - Add filtering of columns for variant table

Issue - State: closed - Opened by sambaxter almost 3 years ago - 4 comments
Labels: Component: frontend

#79 - Add filtering of columns for variant table

Issue - State: closed - Opened by sambaxter almost 3 years ago - 4 comments
Labels: Component: frontend

#78 - Version defaulting

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#78 - Version defaulting

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#77 - Add sorting functionality to variant list

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#77 - Add sorting functionality to variant list

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#76 - Change "username" to "email"

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#76 - Change "username" to "email"

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Component: frontend

#75 - Activation of user when added to list

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Component: website

#75 - Activation of user when added to list

Issue - State: closed - Opened by sambaxter almost 3 years ago - 1 comment
Labels: Component: website

#74 - Allow specifying a transcript for custom variant lists

Issue - State: closed - Opened by sambaxter almost 3 years ago - 5 comments
Labels: Component: worker

#74 - Allow specifying a transcript for custom variant lists

Issue - State: closed - Opened by sambaxter almost 3 years ago - 5 comments
Labels: Component: worker

#73 - Error when renaming variant list

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Bug, Component: website

#73 - Error when renaming variant list

Issue - State: closed - Opened by sambaxter almost 3 years ago
Labels: Bug, Component: website

#72 - Architecture diagram

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: documentation

#72 - Architecture diagram

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: documentation

#71 - Run tests before deploying

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: infrastructure

#71 - Run tests before deploying

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: infrastructure

#70 - Use hailctl to start Dataproc clusters

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: data pipelines

#70 - Use hailctl to start Dataproc clusters

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: data pipelines

#69 - Document running data pipelines

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: documentation

#69 - Document running data pipelines

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: documentation

#68 - Document running database migrations

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: documentation

#68 - Document running database migrations

Issue - State: closed - Opened by nawatts almost 3 years ago
Labels: Component: documentation

#67 - Run ClinVar import on a schedule

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: data pipelines, Component: infrastructure

#67 - Run ClinVar import on a schedule

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: data pipelines, Component: infrastructure

#66 - Handle worker requests that repeatedly fail / time out

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: worker, Component: infrastructure

#66 - Handle worker requests that repeatedly fail / time out

Issue - State: open - Opened by nawatts almost 3 years ago
Labels: Component: worker, Component: infrastructure

#65 - Configure structured logging

Issue - State: closed - Opened by nawatts almost 3 years ago - 3 comments
Labels: Component: website, Component: worker, High priority

#65 - Configure structured logging

Issue - State: closed - Opened by nawatts almost 3 years ago - 3 comments
Labels: Component: website, Component: worker, High priority

#64 - Add report view

Issue - State: closed - Opened by nawatts over 3 years ago - 2 comments
Labels: Component: frontend, High priority

#64 - Add report view

Issue - State: closed - Opened by nawatts over 3 years ago - 2 comments
Labels: Component: frontend, High priority

#63 - Allow including variants based on condition in ClinVar

Issue - State: open - Opened by nawatts over 3 years ago - 2 comments
Labels: Component: website, Component: data pipelines, Component: worker, Component: frontend

#63 - Allow including variants based on condition in ClinVar

Issue - State: open - Opened by nawatts over 3 years ago - 2 comments
Labels: Component: website, Component: data pipelines, Component: worker, Component: frontend

#62 - Sort variants table by allele frequency

Issue - State: closed - Opened by nawatts over 3 years ago - 4 comments
Labels: Component: frontend