Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / broadinstitute/2020-06-01-evidence-of-state-switching-in-single-cell-drug-response-broad issues and pull requests

#13 - Absolute proportional difference of clusters from controls

Issue - State: open - Opened by hkhawar almost 4 years ago - 3 comments

#13 - Absolute proportional difference of clusters from controls

Issue - State: open - Opened by hkhawar almost 4 years ago - 3 comments

#12 - Proportional differences

Issue - State: open - Opened by hkhawar about 4 years ago - 1 comment

#12 - Proportional differences

Issue - State: open - Opened by hkhawar about 4 years ago - 1 comment

#11 - UMAP_visualization of K-cluster labels

Issue - State: open - Opened by hkhawar about 4 years ago

#11 - UMAP_visualization of K-cluster labels

Issue - State: open - Opened by hkhawar about 4 years ago

#10 - Median Cluster cell counts for all drugs at each dose

Issue - State: open - Opened by hkhawar about 4 years ago

#10 - Median Cluster cell counts for all drugs at each dose

Issue - State: open - Opened by hkhawar about 4 years ago

#9 - Absolute cluster counts for drug doses

Issue - State: open - Opened by hkhawar about 4 years ago

#9 - Absolute cluster counts for drug doses

Issue - State: open - Opened by hkhawar about 4 years ago

#7 - Compound UMAPs with DMSO

Issue - State: open - Opened by gwaybio about 4 years ago - 5 comments

#6 - Adding single cell normalization notebooks (standardize, spherize, Harmony)

Pull Request - State: closed - Opened by gwaybio over 4 years ago - 1 comment

#5 - Method to consider

Issue - State: open - Opened by gwaybio over 4 years ago

#4 - Consider pycytominer for whitening

Issue - State: open - Opened by gwaybio over 4 years ago

#3 - Harmony batch effect correction

Issue - State: open - Opened by gwaybio over 4 years ago - 11 comments
Labels: experiment

#2 - Whitening performed to correct batch affects

Issue - State: open - Opened by hkhawar over 4 years ago - 25 comments
Labels: Analysis

#1 - Metadata and Platemap

Issue - State: open - Opened by hkhawar over 4 years ago - 1 comment
Labels: Metadata