Ecosyste.ms: Issues
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GitHub / brian-team/brian2modelfitting issues and pull requests
#76 - Fix efel units
Pull Request -
State: closed - Opened by mstimberg 12 months ago
#75 - Update build infrastructure and import/dependencies
Pull Request -
State: closed - Opened by mstimberg 12 months ago
#74 - Issue with Multi-run of Hodgkin-Huxley Example
Issue -
State: open - Opened by michmgee about 1 year ago
- 3 comments
#73 - Make dependencies like sbi optional
Issue -
State: closed - Opened by mstimberg about 1 year ago
Labels: enhancement
#72 - Improve the simulation-based inference model
Issue -
State: open - Opened by bdevans over 1 year ago
#71 - Implement multi-objective optimisation
Issue -
State: open - Opened by bdevans over 1 year ago
#70 - Enable the user to define features for model fitting
Issue -
State: open - Opened by bdevans over 1 year ago
#69 - Compare model fitting algorithms
Issue -
State: open - Opened by bdevans over 1 year ago
#68 - Update nevergrad version
Pull Request -
State: closed - Opened by mstimberg over 2 years ago
- 1 comment
#67 - dummy pull request to debug efel issues
Pull Request -
State: closed - Opened by mstimberg almost 3 years ago
#66 - Remove lmfit
Pull Request -
State: closed - Opened by mstimberg almost 3 years ago
- 1 comment
#65 - Fix handling of multiple variables with differing t_start/t_weights in refine
Pull Request -
State: closed - Opened by mstimberg about 3 years ago
- 3 comments
#64 - GSoC 2021: Support of the simulation-based inference with the model fitting toolbox
Pull Request -
State: closed - Opened by akapet00 about 3 years ago
- 2 comments
#63 - Update tests
Pull Request -
State: closed - Opened by akapet00 about 3 years ago
#62 - Enable GPU support
Issue -
State: closed - Opened by akapet00 about 3 years ago
Labels: enhancement
#61 - enable gpu support
Pull Request -
State: closed - Opened by akapet00 about 3 years ago
- 1 comment
Labels: enhancement
#60 - Add spike support
Pull Request -
State: closed - Opened by akapet00 about 3 years ago
- 1 comment
#59 - Multiple output var support
Pull Request -
State: closed - Opened by akapet00 about 3 years ago
- 1 comment
#58 - Enhance posterior viz
Pull Request -
State: closed - Opened by akapet00 about 3 years ago
- 1 comment
#57 - Refactor `Inferencer`/`Fitter`
Issue -
State: open - Opened by mstimberg about 3 years ago
#56 - Add documentation for sbi
Issue -
State: closed - Opened by mstimberg about 3 years ago
#55 - Add tests for sbi
Issue -
State: closed - Opened by mstimberg about 3 years ago
#54 - Support spikes in sbi
Issue -
State: closed - Opened by mstimberg about 3 years ago
Labels: enhancement
#53 - Support multiple output variables for sbi
Issue -
State: closed - Opened by mstimberg about 3 years ago
Labels: enhancement
#52 - Add store load functionality
Pull Request -
State: closed - Opened by akapet00 over 3 years ago
#51 - Inestigate additional visualization techniques of parameter space
Issue -
State: closed - Opened by akapet00 over 3 years ago
Labels: enhancement
#50 - Enable all inference methods included in `sbi`
Issue -
State: closed - Opened by akapet00 over 3 years ago
- 2 comments
#49 - Add sbi wrapper class
Pull Request -
State: closed - Opened by akapet00 over 3 years ago
- 5 comments
#48 - Generalize `FeatureMetric`
Issue -
State: open - Opened by mstimberg over 3 years ago
- 1 comment
Labels: enhancement
#47 - Split up simulations if necessary
Issue -
State: closed - Opened by mstimberg over 3 years ago
- 2 comments
#46 - Store simulation/training results
Issue -
State: closed - Opened by mstimberg over 3 years ago
- 4 comments
#45 - Investigate using dimensionality-reduction methods on outputs
Issue -
State: closed - Opened by mstimberg over 3 years ago
- 7 comments
#44 - Create class to wrap first stages of sbi
Issue -
State: closed - Opened by mstimberg over 3 years ago
- 1 comment
#43 - Add an example to visualize the evolutuion of fitted parameters in bounded parameter space
Pull Request -
State: open - Opened by akapet00 over 3 years ago
- 4 comments
#42 - Fix: Fitter exception message #41
Pull Request -
State: closed - Opened by eslam69 over 3 years ago
- 7 comments
#41 - Typo in the exception message at the assertion of optimizer's parent class
Issue -
State: closed - Opened by eslam69 over 3 years ago
- 1 comment
#40 - Add DragonFly optimizer Example
Pull Request -
State: open - Opened by eslam69 over 3 years ago
- 4 comments
#39 - GSoC Example
Pull Request -
State: open - Opened by pb663 over 3 years ago
#38 - Preliminary support for multi-objective optimization
Pull Request -
State: closed - Opened by mstimberg almost 4 years ago
- 15 comments
#37 - Deal with minimal population sizes and budgets in Nevergrad
Pull Request -
State: closed - Opened by mstimberg about 4 years ago
#36 - Support dynamical coupling models
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 3 comments
#35 - nevegrad 'instrumentation' problem
Issue -
State: closed - Opened by gvignoud over 4 years ago
- 2 comments
#34 - [MRG] Fitter.generate for multiple variables
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 3 comments
#33 - [MRG] provide access to target variable in model
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 1 comment
#32 - Make Gamma factor calculation more consistent
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
#31 - [MRG] Temporal weighting
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 13 comments
#30 - [WIP] Display/return quantities with units
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 3 comments
#29 - [MRG] TraceFitter.refine with calculated gradient
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
#28 - [MRG] Add a refine function that uses lmfit.minimize
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 32 comments
#27 - Bug with last merge
Issue -
State: closed - Opened by romainbrette over 4 years ago
- 2 comments
Labels: bug
#26 - Do not use Nevergrad recommendation by default
Pull Request -
State: closed - Opened by mstimberg over 4 years ago
- 1 comment
#25 - Interface with sequential optimization algorithms
Issue -
State: closed - Opened by romainbrette over 4 years ago
- 2 comments
Labels: enhancement
#24 - Investigate bug with nevergrad 0.3
Issue -
State: closed - Opened by mstimberg over 4 years ago
- 1 comment
Labels: bug
#23 - Dynamical coupling
Issue -
State: closed - Opened by romainbrette over 4 years ago
- 1 comment
Labels: enhancement
#22 - Temporal weighting of error
Issue -
State: closed - Opened by romainbrette over 4 years ago
Labels: enhancement
#21 - 10 times more samples as requested
Issue -
State: closed - Opened by romainbrette over 4 years ago
- 2 comments
Labels: bug
#20 - Tools for analyzing results
Issue -
State: open - Opened by romainbrette over 4 years ago
Labels: enhancement
#19 - Online display of best parameters is not readable
Issue -
State: closed - Opened by romainbrette over 4 years ago
Labels: enhancement
#18 - Units of results
Issue -
State: closed - Opened by romainbrette almost 5 years ago
- 1 comment
#17 - [MRG] Avoid DeprecationWarning when importing skopt/sklearn
Pull Request -
State: closed - Opened by mstimberg almost 5 years ago
- 2 comments
#16 - Nevergrad's recommendation can give wrong result
Issue -
State: closed - Opened by mstimberg almost 5 years ago
- 4 comments
Labels: bug, question
#15 - [MRG] Fix fit/generate/fit issue
Pull Request -
State: closed - Opened by mstimberg almost 5 years ago
#14 - Cannot run another `fit` after `generate`
Issue -
State: closed - Opened by mstimberg almost 5 years ago
Labels: bug
#13 - Minor fixes
Pull Request -
State: closed - Opened by mstimberg about 5 years ago
#12 - Add tests for FeatureMetric and slightly refactor it
Pull Request -
State: closed - Opened by mstimberg about 5 years ago
#11 - Fix doc references and rename `simulation` module
Pull Request -
State: closed - Opened by mstimberg about 5 years ago
#10 - Simplify package
Pull Request -
State: closed - Opened by mstimberg about 5 years ago
#9 - Change shapes of arguments for get_features/get_errors
Pull Request -
State: closed - Opened by mstimberg about 5 years ago
- 1 comment
#8 - Wrap string equations into Equations objects
Issue -
State: closed - Opened by mstimberg about 5 years ago
#7 - Use more specific exception types
Issue -
State: closed - Opened by mstimberg about 5 years ago
- 1 comment
#6 - Fix string continuation in exceptions
Issue -
State: closed - Opened by mstimberg about 5 years ago
#5 - Default values for metric/optimizer
Issue -
State: open - Opened by mstimberg about 5 years ago
- 1 comment
#4 - Add option to discard a part of a simulation
Issue -
State: closed - Opened by mstimberg about 5 years ago
#3 - Inconsistent handling between "best result" and error
Issue -
State: closed - Opened by mstimberg about 5 years ago
#2 - GSoC 2019: Model Fitting
Pull Request -
State: closed - Opened by alTeska about 5 years ago
- 2 comments
#1 - Merging with brian2tools
Issue -
State: closed - Opened by romainbrette over 8 years ago
- 6 comments
Labels: question