Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / brentp/echtvar issues and pull requests
#44 - error when encoding gnomad 4.1 vcf
Issue -
State: closed - Opened by atimms 21 days ago
- 2 comments
#43 - Missing Number= with gnomad.v3.1.2.echtvar.v2.zip
Issue -
State: open - Opened by fellen31 2 months ago
#42 - Update CADD link and warn about licensing requirements
Pull Request -
State: closed - Opened by dvg-p4 3 months ago
#41 - Unsupported Field Type: Flag
Issue -
State: closed - Opened by Fyodir 6 months ago
- 1 comment
#40 - Filter Echtvar annotated VCF
Issue -
State: open - Opened by kcygan 8 months ago
#39 - Feature/fix issue 36
Pull Request -
State: closed - Opened by migbro 9 months ago
- 7 comments
#38 - 🔧 description testing updates
Pull Request -
State: closed - Opened by dmiller15 9 months ago
#37 - non ACGT Bug fix kinda
Pull Request -
State: closed - Opened by migbro 9 months ago
- 6 comments
#36 - 🐛 non ACGT ALT character
Issue -
State: closed - Opened by migbro 9 months ago
- 10 comments
#35 - ✨ scrape descriptions on encode
Pull Request -
State: closed - Opened by dmiller15 9 months ago
- 6 comments
#34 - 🔨 Scrape Number and Specify Description
Pull Request -
State: closed - Opened by migbro 9 months ago
- 4 comments
#33 - Feature Request: Port/Add Description
Issue -
State: closed - Opened by migbro 9 months ago
- 2 comments
#32 - 🐛 report BCF2 missing floats
Pull Request -
State: closed - Opened by dmiller15 about 1 year ago
- 2 comments
#32 - 🐛 report BCF2 missing floats
Pull Request -
State: closed - Opened by dmiller15 about 1 year ago
- 2 comments
#30 - error om encoding dbsnp - "Large file option has not been set". echtvar 0.1.7
Issue -
State: closed - Opened by ruslan-abasov about 1 year ago
- 3 comments
#29 - Help message for echtvar anno should call the arg <OUTPUT_BCF>, not <OUTPUT_VCF>
Issue -
State: closed - Opened by dvg-p4 over 1 year ago
- 3 comments
#28 - -1 as a default missing value does not work when the actual annotation value could be -1
Issue -
State: closed - Opened by dvg-p4 over 1 year ago
- 12 comments
#27 - Fix vcf header in cadd2vcf.py
Pull Request -
State: closed - Opened by dvg-p4 over 1 year ago
- 1 comment
#26 - encode error
Issue -
State: open - Opened by cheanney over 1 year ago
- 1 comment
#25 - Typos
Pull Request -
State: closed - Opened by enormandeau over 1 year ago
- 1 comment
#24 - static binary
Issue -
State: closed - Opened by jianshu93 about 2 years ago
- 6 comments
#23 - position mistake of warning?:`[warning] found non ACGT ALT character 'N', encoding as 'T' for position: 1547942`
Issue -
State: closed - Opened by liserjrqlxue over 2 years ago
- 1 comment
#22 - warn for VCFv4.2:[warning] found non ACGT ALT character '*', encoding as 'T' for position: 774922
Issue -
State: closed - Opened by liserjrqlxue over 2 years ago
- 11 comments
#21 - Echtvar slower on VCF with many samples
Issue -
State: closed - Opened by edg1983 over 2 years ago
- 2 comments
#20 - dbsnp and multiallelic VCFs
Issue -
State: closed - Opened by sstadick over 2 years ago
- 4 comments
#19 - INFO field header key order
Issue -
State: closed - Opened by JakeHagen over 2 years ago
- 3 comments
#18 - [bugfix] Fix MacOS builds
Pull Request -
State: closed - Opened by sstadick over 2 years ago
- 3 comments
#17 - Running on MacOS
Issue -
State: closed - Opened by sstadick over 2 years ago
- 4 comments
#16 - [bugfix] Fix handling of ref-only records in VCF
Pull Request -
State: closed - Opened by sstadick over 2 years ago
- 1 comment
#15 - dbnsfp script - output minimum for certain values
Pull Request -
State: closed - Opened by JakeHagen over 2 years ago
- 3 comments
#14 - Encode TSV indexed files
Issue -
State: closed - Opened by edg1983 over 2 years ago
- 2 comments
#13 - allow string (constants) in expressions
Issue -
State: open - Opened by brentp over 2 years ago
#12 - index out of range when encoding large VCF
Issue -
State: closed - Opened by JakeHagen over 2 years ago
- 9 comments
#11 - Multi-allelic sites
Issue -
State: closed - Opened by m-pauper over 2 years ago
- 4 comments
#10 - Multiplier for float
Issue -
State: closed - Opened by m-pauper over 2 years ago
- 3 comments
#9 - Kernel too old
Issue -
State: open - Opened by m-pauper over 2 years ago
- 3 comments
#8 - thread 'main' panicked at 'index out of bounds
Issue -
State: closed - Opened by davetang over 2 years ago
- 6 comments
#7 - Categories
Pull Request -
State: closed - Opened by brentp almost 3 years ago
#6 - sanitize alias
Issue -
State: open - Opened by brentp almost 3 years ago
#5 - Fix anno usage
Pull Request -
State: closed - Opened by wwliao almost 3 years ago
- 1 comment
#4 - use thin_vec for larger variants
Issue -
State: open - Opened by brentp almost 3 years ago
- 1 comment
Labels: enhancement
#3 - allow extracting and annotating with FILTER field and with flags
Issue -
State: closed - Opened by brentp almost 3 years ago
- 1 comment
#2 - support multiple echtvar files
Issue -
State: closed - Opened by brentp almost 3 years ago
#1 - handle 'chr21' vs '21'
Issue -
State: closed - Opened by brentp almost 3 years ago