borgwardtlab/multicenter-sepsis issues and pull requests

#32 - Local branch michael

Pull Request - State: closed - Opened by mi92 almost 2 years ago

#32 - Local branch michael

Pull Request - State: closed - Opened by mi92 almost 2 years ago

#31 - Preparing Shapley computation for deletion

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#31 - Preparing Shapley computation for deletion

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#30 - Integrate Shapley computation (with @ExpectationMax)

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#30 - Integrate Shapley computation (with @ExpectationMax)

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#29 - Added support for `iteration` parameter

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#29 - Added support for `iteration` parameter

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#28 - Added support for `iteration` parameter

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#28 - Added support for `iteration` parameter

Pull Request - State: closed - Opened by Pseudomanifold over 3 years ago

#27 - Refactor patient-based evaluation wrt label shifting

Issue - State: closed - Opened by Pseudomanifold over 3 years ago - 1 comment

#27 - Refactor patient-based evaluation wrt label shifting

Issue - State: closed - Opened by Pseudomanifold over 3 years ago - 1 comment

#26 - Adapt eval script outputs to agree upon format

Issue - State: closed - Opened by ExpectationMax about 4 years ago - 5 comments

#26 - Adapt eval script outputs to agree upon format

Issue - State: closed - Opened by ExpectationMax about 4 years ago - 5 comments

#25 - Wavelet transforms

Issue - State: closed - Opened by nbenn about 4 years ago - 1 comment

#25 - Wavelet transforms

Issue - State: closed - Opened by nbenn about 4 years ago - 1 comment

#24 - add feature subsetter for physionet challenge models (trained or tested on physionet)

Issue - State: closed - Opened by mi92 about 4 years ago - 1 comment

#24 - add feature subsetter for physionet challenge models (trained or tested on physionet)

Issue - State: closed - Opened by mi92 about 4 years ago - 1 comment

#23 - add a flag for choosing between patient based and instance based loss computation in deep models

Issue - State: closed - Opened by mi92 about 4 years ago

#23 - add a flag for choosing between patient based and instance based loss computation in deep models

Issue - State: closed - Opened by mi92 about 4 years ago

#22 - Overfitting of RNN models: weight decay

Issue - State: closed - Opened by mi92 about 4 years ago

#22 - Overfitting of RNN models: weight decay

Issue - State: closed - Opened by mi92 about 4 years ago

#21 - Update Preprocessing Pipeline: account for proper filtering of baseline scores

Issue - State: closed - Opened by mi92 about 4 years ago

#21 - Update Preprocessing Pipeline: account for proper filtering of baseline scores

Issue - State: closed - Opened by mi92 about 4 years ago

#20 - Add measurement frequencies to Lookback Feature transform

Issue - State: closed - Opened by mi92 about 4 years ago - 1 comment

#20 - Add measurement frequencies to Lookback Feature transform

Issue - State: closed - Opened by mi92 about 4 years ago - 1 comment

#19 - Features for deep

Pull Request - State: closed - Opened by mi92 about 4 years ago

#19 - Features for deep

Pull Request - State: closed - Opened by mi92 about 4 years ago

#18 - Evaluation script for sklearn pipeline

Issue - State: closed - Opened by ExpectationMax about 4 years ago - 1 comment

#18 - Evaluation script for sklearn pipeline

Issue - State: closed - Opened by ExpectationMax about 4 years ago - 1 comment

#17 - Unable to access `bun_cr` feature in data frame

Issue - State: closed - Opened by Pseudomanifold about 4 years ago - 2 comments

#17 - Unable to access `bun_cr` feature in data frame

Issue - State: closed - Opened by Pseudomanifold about 4 years ago - 2 comments

#16 - Sklearn model failing on challenge dataset

Issue - State: closed - Opened by mi92 about 4 years ago - 2 comments

#16 - Sklearn model failing on challenge dataset

Issue - State: closed - Opened by mi92 about 4 years ago - 2 comments

#15 - Make large feature set (of the shallow models) compatible with deep models, to test whether the manual feature engineering is helpful there too

Issue - State: closed - Opened by mi92 about 4 years ago - 1 comment
Labels: feature engineering

#15 - Make large feature set (of the shallow models) compatible with deep models, to test whether the manual feature engineering is helpful there too

Issue - State: closed - Opened by mi92 about 4 years ago - 1 comment
Labels: feature engineering

#14 - Retraining after early stopping to include validation data in model performance estimate

Issue - State: closed - Opened by ExpectationMax about 4 years ago

#14 - Retraining after early stopping to include validation data in model performance estimate

Issue - State: closed - Opened by ExpectationMax about 4 years ago

#13 - Check distribution shift of train--val--test splits

Issue - State: closed - Opened by Pseudomanifold about 4 years ago

#13 - Check distribution shift of train--val--test splits

Issue - State: closed - Opened by Pseudomanifold about 4 years ago

#12 - Move early stopping to loss instead of physionet score

Issue - State: closed - Opened by ExpectationMax about 4 years ago

#12 - Move early stopping to loss instead of physionet score

Issue - State: closed - Opened by ExpectationMax about 4 years ago

#11 - There is a difference in performance between the masked evaluation and non-masked evalaution

Issue - State: closed - Opened by ExpectationMax over 4 years ago - 4 comments

#10 - How can we harmonize sklearn model and torch model evaluation?

Issue - State: closed - Opened by ExpectationMax over 4 years ago

#9 - Batch-size is not properly varied in hypersearch (always 32)

Issue - State: closed - Opened by mi92 over 4 years ago

#8 - Error when reloading model for final evaluation after training on EICU

Issue - State: closed - Opened by mi92 over 4 years ago - 4 comments

#7 - Eval script which masks online information

Issue - State: closed - Opened by ExpectationMax over 4 years ago

#6 - (medium prio) implement regression target / label

Issue - State: closed - Opened by mi92 over 4 years ago - 2 comments

#5 - Hyperparameter tuning of torch model

Issue - State: closed - Opened by ExpectationMax over 4 years ago

#4 - Attention Model

Issue - State: closed - Opened by ExpectationMax over 4 years ago - 1 comment

#3 - Simple GRU Model

Issue - State: closed - Opened by ExpectationMax over 4 years ago

#2 - Single index

Pull Request - State: closed - Opened by mi92 over 4 years ago

#1 - Dask

Pull Request - State: closed - Opened by mi92 over 4 years ago

GitHub / borgwardtlab/multicenter-sepsis issues and pull requests