Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / bodenmillergroup/imcpluginscp issues and pull requests
#53 - Maintenance
Issue -
State: closed - Opened by jwindhager almost 2 years ago
- 1 comment
#52 - IMC - CorrectSpilloverApply
Issue -
State: closed - Opened by jsymington over 2 years ago
- 2 comments
#51 - Error while loading Smooth Multichannel: Could not find the Smooth Multichannel module
Issue -
State: closed - Opened by luglilab over 3 years ago
- 5 comments
#50 - Implementing measurement selection for MeasureObjectIntensityMultichannel
Pull Request -
State: open - Opened by votti almost 4 years ago
- 3 comments
#49 - Regular CI test and badge
Pull Request -
State: closed - Opened by nilseling almost 4 years ago
- 4 comments
#48 - Fixes wrong suffix appending for compensated measurements
Pull Request -
State: closed - Opened by votti almost 4 years ago
#47 - Add Image level metadata variable table in exportvarcsv
Pull Request -
State: closed - Opened by votti almost 4 years ago
#46 - Develop cp2
Pull Request -
State: closed - Opened by votti about 4 years ago
#45 - A module to export measurement variable metadata.
Pull Request -
State: closed - Opened by votti about 4 years ago
#44 - Add CI via github actions
Pull Request -
State: closed - Opened by votti about 4 years ago
#43 - Fix docstring bug
Pull Request -
State: closed - Opened by votti about 4 years ago
#42 - Update README
Pull Request -
State: closed - Opened by votti about 4 years ago
#41 - Update Modules to CP4
Pull Request -
State: closed - Opened by votti about 4 years ago
#40 - usage on CellProfiler 4
Issue -
State: closed - Opened by SBata about 4 years ago
- 8 comments
#39 - Could not run pipeline
Issue -
State: closed - Opened by KaWingLee9 about 4 years ago
- 1 comment
#38 - Make crop parametric
Pull Request -
State: closed - Opened by votti over 4 years ago
- 1 comment
#37 - Stackimages crashes when trying to raise shape missmatch error
Issue -
State: closed - Opened by votti almost 5 years ago
#36 - Rename plugin names to not include whitespaces
Issue -
State: closed - Opened by jwindhager about 5 years ago
- 4 comments
Labels: enhancement
#35 - Feature objectcrops cp3
Pull Request -
State: closed - Opened by votti over 5 years ago
#34 - A module to allow clipping the image range
Pull Request -
State: closed - Opened by votti over 5 years ago
#33 - Adds the scipy median filter
Pull Request -
State: closed - Opened by votti over 5 years ago
#32 - CP3: Summarize Stack: visualization gives error
Issue -
State: closed - Opened by votti over 5 years ago
- 1 comment
Labels: bug, wontfix
#31 - Mask2binstack: stacks not accurately scaled
Issue -
State: closed - Opened by votti over 5 years ago
Labels: bug
#30 - Feature savecrops cp3
Pull Request -
State: closed - Opened by votti almost 6 years ago
- 1 comment
#29 - StackImages module
Pull Request -
State: closed - Opened by votti almost 6 years ago
#28 - Add stack images module
Issue -
State: closed - Opened by votti almost 6 years ago
- 1 comment
Labels: enhancement
#27 - Correct spillover matrix or TIFF image used for CP3 spillover correction
Issue -
State: closed - Opened by arcolombo almost 6 years ago
- 1 comment
#26 - [WIP] Fixes compensation with na measurements
Pull Request -
State: closed - Opened by votti almost 6 years ago
#26 - [WIP] Fixes compensation with na measurements
Pull Request -
State: closed - Opened by votti almost 6 years ago
#25 - Correctspillovermeasurement does not work with non-finite measurement values
Issue -
State: closed - Opened by votti almost 6 years ago
#24 - Merge develop-cp3 into master
Pull Request -
State: closed - Opened by votti about 6 years ago
#23 - Smooth multichannel error: matplotlib 2.1.2, pyamg=3.3.2 error : "AttributeError: 'module' object has no attribute 'fromarray'".
Issue -
State: closed - Opened by arcolombo about 6 years ago
- 3 comments
#22 - [WIP] Adapts save_object_crops for cp3
Pull Request -
State: closed - Opened by votti over 6 years ago
#21 - "Removeoulier" enable scaling to bitdepth
Pull Request -
State: closed - Opened by votti over 6 years ago
- 2 comments
#20 - CP2: `CorrectSpilloverMeasurements` does not work in Windows
Issue -
State: closed - Opened by votti over 6 years ago
- 2 comments
Labels: bug
#19 - MeasureObjectIntensityMultichannel and MeasureImageIntensityMultichannel have different indexing
Issue -
State: closed - Opened by votti over 6 years ago
- 4 comments
Labels: bug
#18 - Question about modifying preferences of CellProfiler to point toward ImcPluginsCP
Issue -
State: closed - Opened by arcolombo over 6 years ago
- 4 comments
#17 - Rescale Objects: Upscale option not correctly implemented
Issue -
State: closed - Opened by votti over 6 years ago
- 1 comment
Labels: bug, wontfix
#16 - CP3: deprecate rescaleobjects
Issue -
State: closed - Opened by votti over 6 years ago
- 1 comment
#15 - make random crop seed parametric
Issue -
State: closed - Opened by smaffiol over 6 years ago
Labels: enhancement
#14 - MeasureObjectIntensity Multichannel - Error: too many indices for array
Issue -
State: closed - Opened by hartlandj over 6 years ago
- 4 comments
#13 - Correct documentation for 'crop bb'
Issue -
State: closed - Opened by votti about 7 years ago
Labels: enhancement
#12 - Feature compensation
Pull Request -
State: closed - Opened by votti about 7 years ago
#11 - Renumber Objects After Rescale Objects
Issue -
State: closed - Opened by ndamond over 7 years ago
- 1 comment
#10 - Feature remove dependencies
Pull Request -
State: closed - Opened by votti over 7 years ago
#9 - Remove dependencies
Issue -
State: closed - Opened by votti over 7 years ago
- 2 comments
#8 - Write documentation
Issue -
State: closed - Opened by votti over 7 years ago
- 1 comment
#7 - Add option to save ilastik compatible tiffs with saveimage
Issue -
State: closed - Opened by mleutenegger over 7 years ago
- 1 comment
#6 - Implement remove outlier filter
Issue -
State: closed - Opened by mleutenegger over 7 years ago
- 1 comment
#5 - Additional CP modules for the IMC pipeline
Pull Request -
State: closed - Opened by votti over 7 years ago
- 2 comments
Labels: enhancement, help wanted
#4 - Add compensation module
Issue -
State: closed - Opened by votti over 7 years ago
- 4 comments
Labels: enhancement
#3 - Add mask to binary module
Issue -
State: closed - Opened by votti over 7 years ago
- 1 comment
Labels: enhancement
#2 - Add crop objects module
Issue -
State: closed - Opened by votti over 7 years ago
- 1 comment
Labels: enhancement
#1 - Add Distance transform module
Issue -
State: closed - Opened by votti over 7 years ago
- 1 comment
Labels: enhancement