bluebrain/nmodl issues and pull requests

#1559 - Bump min Python version from 3.8 to 3.9

Pull Request - State: open - Opened by JCGoran 11 days ago

#1558 - Fix for finite differences.

Pull Request - State: closed - Opened by 1uc 13 days ago

#1557 - Support PROTECT via _NMODLMUTEX{,UN}LOCK.

Pull Request - State: closed - Opened by 1uc 14 days ago

#1556 - Lower PROTECT related code.

Pull Request - State: closed - Opened by 1uc 14 days ago

#1555 - Fix race condition in CMake code.

Pull Request - State: closed - Opened by 1uc 19 days ago - 1 comment

#1554 - Fix CMake integration of NMODL generation.

Pull Request - State: closed - Opened by 1uc 20 days ago - 1 comment

#1553 - Fix NMODL_GENERATED_SOURCES without Python.

Pull Request - State: closed - Opened by 1uc 20 days ago

#1552 - Fix typo

Pull Request - State: closed - Opened by JCGoran 20 days ago

#1551 - Create CVODE on demand.

Pull Request - State: closed - Opened by 1uc 21 days ago

#1550 - Hide `CodegenCppVisitor::setup`.

Pull Request - State: closed - Opened by 1uc 21 days ago

#1549 - Extend `reindent_text(..., indent_level)`.

Pull Request - State: closed - Opened by 1uc 21 days ago

#1548 - Remove superfluous Codegen ctor.

Pull Request - State: closed - Opened by 1uc 21 days ago

#1547 - For CoreNEURON, DERIVATIVE doesn't need sympy.

Pull Request - State: closed - Opened by 1uc 26 days ago

#1546 - Refactor variable name of random variables.

Pull Request - State: closed - Opened by 1uc 27 days ago

#1545 - Rename `print_parallel_iteration_hint`.

Pull Request - State: closed - Opened by 1uc 27 days ago

#1544 - Lift shared `print_top_verbatim_blocks` code.

Pull Request - State: closed - Opened by 1uc 28 days ago

#1543 - Lower printing of VERBATIM code.

Pull Request - State: closed - Opened by 1uc 28 days ago

#1542 - Move shared parallel hint code.

Pull Request - State: closed - Opened by 1uc 28 days ago

#1541 - Fix some whitespace.

Pull Request - State: closed - Opened by 1uc 28 days ago

#1540 - Add SIMD/ivdep pragmas.

Pull Request - State: open - Opened by 1uc 28 days ago

#1539 - Move from pybind11 to nanobind + raw C API

Issue - State: open - Opened by JCGoran 29 days ago
Labels: python, wheel

#1538 - Don't have instance copies of POINTER.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 2 comments

#1537 - Prepare for deprecating `vectorize`.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1536 - Consider LINEAR as vectorizeable.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1535 - Remove tests for not vectorized code.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1534 - Adjust thread-variable promotion condition.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1533 - Consider NONLINEAR vectorizable.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 1 comment

#1532 - Handle voltage via instance specific copy.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1531 - Fix SymPy errors when using reserved symbols in `differentiate2c`

Pull Request - State: open - Opened by JCGoran about 1 month ago

#1530 - Properly handle user functions when calling `integrate2c`

Pull Request - State: open - Opened by JCGoran about 1 month ago

#1529 - Avoid premature segfaults.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 2 comments

#1528 - Rename 'shared_global'.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1527 - Ignore '.pkl' and '.png' in 'test/usecases'.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1526 - Error checking for SOLVE procedure.

Issue - State: open - Opened by 1uc about 1 month ago

#1525 - Support `SUFFIX nothing`.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 1 comment

#1524 - Implement `stringutils::join_arguments`.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1523 - Refactor printing FUNCTIONS.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1522 - Refactor HOC/Python wrapper printing.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1521 - SOLVE a PROCEDURE.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 2 comments

#1520 - Hide most functions/global variables.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 1 comment

#1519 - Prevent inlining VERBATIM.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1518 - Run tests in parallel.

Pull Request - State: closed - Opened by 1uc about 1 month ago - 1 comment

#1517 - Add support for diffing against `sympy.Indexed` instances

Pull Request - State: closed - Opened by JCGoran about 1 month ago

#1516 - Eigen solvers in ARTIFICIAL_CELLS can't use voltage.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1515 - Add longitudinal diffusion usecase to suite

Pull Request - State: closed - Opened by JCGoran about 1 month ago

#1514 - Fix pip.

Pull Request - State: closed - Opened by 1uc about 1 month ago

#1513 - Fix FUNCTION_TABLE with POINT_PROCESS/ARTIFICIAL_CELL.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1512 - NONLINEAR requires `sympy --analytic`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1511 - Refactor forcing `sympy --analytic`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1510 - Simplify `try_replace_tagged_statement`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1509 - Improve naming of `LinEquation`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1508 - Remove declaration of `remove_statements_from_block` method

Pull Request - State: closed - Opened by JCGoran about 2 months ago

#1507 - Put together NMODL Developer documentation (Implementation aspects)

Issue - State: open - Opened by pramodk about 2 months ago
Labels: bbp-closure

#1506 - Review NMODLs name collision handling.

Issue - State: open - Opened by 1uc about 2 months ago

#1505 - Improve comments.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1504 - Implement LONGITUDINAL_DIFFUSION.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1503 - Broken build-system for copying Python files.

Issue - State: closed - Opened by 1uc about 2 months ago - 1 comment

#1502 - Refactor printing setup code in entrypoints.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1501 - MOD files containing two SOLVEs don't compile.

Issue - State: open - Opened by 1uc about 2 months ago - 1 comment

#1500 - Remove pointless macros from `crout.hpp`

Issue - State: open - Opened by 1uc about 2 months ago

#1499 - Number files lexicographically.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1498 - Improve COMPARTMENT names & documentation.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1497 - Improve `LONGITUDINAL_DIFFUSION`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1496 - Remove empty visitor from `main.cpp`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1495 - Use target fmt::fmt instead of fmt

Pull Request - State: closed - Opened by alkino about 2 months ago

#1494 - Safely join paths in `main.cpp`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1493 - Codegen for CVODE

Pull Request - State: closed - Opened by JCGoran about 2 months ago
Labels: NEURON codegen

#1492 - Remove ARM-based MacOS from CI

Pull Request - State: closed - Opened by JCGoran about 2 months ago - 1 comment

#1491 - Run Sonar in parallel.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1490 - Bump MacOS versions in CI

Pull Request - State: closed - Opened by JCGoran about 2 months ago

#1489 - More debuggable CI by using `--verbose`.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1488 - Make unit-tests Catch2 v2 compatible.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1487 - System dependencies for sonsarsource

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1486 - Merge all unit-test executables.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1485 - Remove unused var

Pull Request - State: closed - Opened by JCGoran about 2 months ago

#1484 - Use finite differences in `differentiate2c` for implicit functions

Pull Request - State: closed - Opened by JCGoran about 2 months ago

#1483 - Add support for diffing expressions with indexed vars in `differentiate2c`

Pull Request - State: closed - Opened by JCGoran about 2 months ago - 1 comment

#1482 - NMODL subcommand order incompatible with `find ... -exec [EXECUTABLE] {} +`

Issue - State: open - Opened by JCGoran about 2 months ago

#1481 - Warning when using SymPy with multiple files

Issue - State: open - Opened by JCGoran about 2 months ago - 1 comment

#1480 - Fiddle CI.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1479 - Run CI to get baseline runtimes.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1478 - Run SonarSource on demand.

Pull Request - State: closed - Opened by 1uc about 2 months ago - 2 comments

#1477 - Remove useless template.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1476 - Use compiled version of spdlog.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1475 - Avoid name collisions.

Pull Request - State: closed - Opened by 1uc about 2 months ago

#1471 - Add `DerivativeOriginalJacobianBlock`

Pull Request - State: closed - Opened by JCGoran 2 months ago

#1467 - Add `CvodeBlock` and `CvodeVisitor`

Pull Request - State: closed - Opened by JCGoran 2 months ago

#1399 - CVODE codgen for NEURON

Pull Request - State: closed - Opened by JCGoran 3 months ago - 8 comments
Labels: NEURON codegen

#1364 - Initial attempt at implementing VERBATIM.

Pull Request - State: closed - Opened by 1uc 4 months ago - 7 comments

#1349 - Use Eigen on CPUs.

Pull Request - State: open - Opened by 1uc 4 months ago - 2 comments

#1035 - Handle `SUFFIX nothing`

Issue - State: closed - Opened by iomaganaris over 1 year ago
Labels: codegen

#956 - Deprecate EXTERNAL constructs

Issue - State: closed - Opened by iomaganaris about 2 years ago - 5 comments
Labels: nmodl_feature_complete

#910 - clang-tidy compliance should be tested in the CI

Issue - State: closed - Opened by olupton over 2 years ago - 1 comment
Labels: enhancement, tools, CI, proposal

#638 - avx2 performance is lower than sse2?

Issue - State: open - Opened by pramodk over 3 years ago - 8 comments
Labels: performance, llvm

#613 - Benchmarking / performance measurement of LLVM backend on Intel CPUs : Part I

Issue - State: open - Opened by pramodk over 3 years ago - 7 comments
Labels: performance, llvm

#548 - Using llvm-mca for statically measuring the performance of machine code

Issue - State: open - Opened by pramodk over 3 years ago
Labels: documentation, performance

#383 - Support for Random number generator as language constructs

Issue - State: closed - Opened by pramodk over 4 years ago - 8 comments
Labels: enhancement, semantics, proposal

#260 - Can we split pyast.cpp into multiple files?

Issue - State: open - Opened by pramodk over 4 years ago - 4 comments
Labels: enhancement, question, python

#131 - Automatic performance modeling with kerncraft

Issue - State: open - Opened by sharkovsky over 5 years ago
Labels: enhancement, performance

#130 - Better support for Random123 routines in verbatim blocks for GPU

Issue - State: open - Opened by pramodk over 5 years ago - 1 comment
Labels: codegen, refactoring, gpu

GitHub / bluebrain/nmodl issues and pull requests