Ecosyste.ms: Issues

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GitHub / bittremieux/falcon issues and pull requests

#29 - Error if no clusters are formed

Issue - State: open - Opened by Philipbear 10 days ago
Labels: enhancement

#28 - Spectral averaging with outlier rejection

Pull Request - State: open - Opened by Janne98 about 1 month ago - 2 comments

#27 - Add Hierarchical Clustering with Linkage Options

Pull Request - State: closed - Opened by Janne98 about 1 month ago

#26 - MS2 spectra without a precursor charge are ignored

Issue - State: open - Opened by YasinEl 7 months ago - 14 comments
Labels: bug

#25 - Fast I/O with lance

Pull Request - State: closed - Opened by Janne98 7 months ago

#24 - Several issues encountered at the execution

Issue - State: closed - Opened by Eli-Rousseau 10 months ago - 6 comments
Labels: bug

#23 - np.object has been deprecated

Issue - State: open - Opened by bittremieux over 1 year ago
Labels: bug

#22 - Help needed with error with positional arguments??

Issue - State: closed - Opened by dulceggm about 2 years ago - 2 comments

#21 - Bug: new version of spectrum_utils changed API interface

Issue - State: closed - Opened by mwang87 about 2 years ago

#20 - Weird numba caching issue

Pull Request - State: open - Opened by tycheyoung over 2 years ago - 2 comments

#19 - Precursor m/z correction

Issue - State: open - Opened by bittremieux almost 3 years ago
Labels: enhancement

#18 - Automatic precursor/fragment mass tolerance

Issue - State: open - Opened by bittremieux almost 3 years ago
Labels: enhancement

#17 - mzML parsing issue

Issue - State: open - Opened by bittremieux about 3 years ago - 1 comment
Labels: bug

#16 - Similar MS/MS did not make it into clusters output

Issue - State: closed - Opened by mwang87 about 3 years ago - 1 comment

#15 - Full File Path in output results

Issue - State: closed - Opened by mwang87 about 3 years ago
Labels: enhancement

#14 - Investigating splitting

Issue - State: open - Opened by mwang87 about 3 years ago - 4 comments

#13 - Memory consumption

Issue - State: closed - Opened by bittremieux about 3 years ago
Labels: enhancement

#12 - Singleton cluster number

Issue - State: closed - Opened by bittremieux about 3 years ago
Labels: bug

#11 - Experiencing Error in Script Execution.

Issue - State: closed - Opened by BenSamy2020 over 3 years ago - 2 comments

#10 - Further dimensionality reduction

Issue - State: closed - Opened by KilianMaes over 3 years ago - 1 comment
Labels: enhancement

#9 - DLL load failed while importing swigfaiss

Issue - State: closed - Opened by chrashwood over 3 years ago - 1 comment

#8 - Correcting the installation

Pull Request - State: closed - Opened by mwang87 over 3 years ago

#7 - Considerably less clusters when scaling is applied

Issue - State: closed - Opened by KilianMaes over 3 years ago - 17 comments

#6 - Avoid throwing an exception when no cluster is found for a charge

Pull Request - State: closed - Opened by KilianMaes almost 4 years ago

#5 - Error thrown when no cluster was found for at least one charge

Issue - State: closed - Opened by KilianMaes almost 4 years ago - 1 comment

#4 - Provide optional rough RT window for clustering

Issue - State: closed - Opened by mwang87 almost 4 years ago

#3 - [Bug] When no retention time is present in MGF, it throws error

Issue - State: closed - Opened by mwang87 almost 4 years ago

#2 - [Bug] Exporting consensus MS2 spectra as MGF

Issue - State: closed - Opened by mwang87 almost 4 years ago

#1 - Adding commandline input to override configs

Issue - State: closed - Opened by mwang87 almost 4 years ago