biothings/smartapi-kg.js issues and pull requests

#94 - Inject reversed MetaEdges based on API list config

Pull Request - State: closed - Opened by tokebe 5 days ago

#93 - Correctly unserialize trapi query operations

Pull Request - State: closed - Opened by rjawesome 2 months ago

#92 - Make query info serializable

Pull Request - State: open - Opened by rjawesome 3 months ago

#91 - take in test examples into smartapi spec

Pull Request - State: open - Opened by rjawesome 3 months ago

#90 - allow pagination to be passed in through smartapi yaml

Pull Request - State: closed - Opened by rjawesome 4 months ago

#89 - Ingest knowledge_level/agent_type from annotations

Pull Request - State: closed - Opened by tokebe 6 months ago

#88 - Export additional types

Pull Request - State: closed - Opened by tokebe 6 months ago - 1 comment

#87 - Allow Predicates, SmartAPI, & ops to be passed in

Pull Request - State: closed - Opened by rjawesome 7 months ago - 1 comment

#86 - use redis for smartapi specs

Pull Request - State: closed - Opened by rjawesome 8 months ago - 1 comment

#85 - build(deps-dev): bump @babel/traverse from 7.14.7 to 7.23.2

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 2 comments
Labels: dependencies

#84 - Migrate to new build system/support typescript migration

Pull Request - State: closed - Opened by tokebe 12 months ago - 2 comments

#83 - build(deps-dev): bump word-wrap from 1.2.3 to 1.2.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#82 - TRAPI 1.4 feature merge

Pull Request - State: closed - Opened by tokebe over 1 year ago - 1 comment

#81 - build(deps): bump got from 9.6.0 to

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#80 - Metapath

Pull Request - State: closed - Opened by rjawesome over 1 year ago - 2 comments

#79 - TRAPI 1.4: Provenance refactor

Pull Request - State: closed - Opened by tokebe over 1 year ago - 1 comment

#78 - build(deps): bump yaml, @commitlint/cli and husky

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#77 - Filter based on qualifiers for trapi apis

Pull Request - State: closed - Opened by rjawesome over 1 year ago - 1 comment

#76 - handle array qualifiers in filter

Pull Request - State: closed - Opened by rjawesome over 1 year ago - 1 comment

#75 - Association kg

Pull Request - State: open - Opened by rjawesome over 1 year ago - 4 comments

#74 - qualifiers in meta knowledge graph

Pull Request - State: closed - Opened by rjawesome over 1 year ago - 1 comment

#73 - build(deps-dev): bump webpack from 5.40.0 to 5.76.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#72 - Handle no maturity level & no server

Pull Request - State: closed - Opened by rjawesome over 1 year ago - 1 comment

#71 - build(deps): bump http-cache-semantics from 4.1.0 to 4.1.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#70 - build(deps): bump json5 from 2.2.0 to 2.2.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#69 - build(deps): bump markdown-it from 10.0.0 to 12.3.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#68 - build(deps): bump marked from 2.1.2 to 4.2.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#67 - build(deps): bump json-schema and jsprim

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#66 - build(deps): bump trim-newlines and meow

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#65 - build(deps): bump minimatch from 3.0.4 to 3.1.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#64 - build(deps): bump qs from 6.5.2 to 6.5.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#63 - Add qualifiers

Pull Request - State: closed - Opened by tokebe almost 2 years ago - 2 comments

#62 - build(deps): bump decode-uri-component from 0.2.0 to 0.2.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#61 - Processing transformer field on operations

Pull Request - State: open - Opened by rjawesome almost 2 years ago - 4 comments

#60 - build(deps): bump loader-utils from 1.4.0 to 1.4.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#59 - Use infores to determine api

Pull Request - State: closed - Opened by rjawesome almost 2 years ago - 2 comments

#58 - Use Codecov for coverage visualization

Pull Request - State: closed - Opened by tokebe about 2 years ago

#57 - feat: support x-trapi for trapi1.3 batch/rate limits

Pull Request - State: closed - Opened by colleenXu about 2 years ago

#56 - handle node information in predicates

Pull Request - State: closed - Opened by rjawesome about 2 years ago - 1 comment

#55 - build(deps): bump terser from 5.7.0 to 5.14.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#54 - fix: :hammer: add nested field to hardcoded data

Pull Request - State: closed - Opened by marcodarko about 2 years ago

#53 - feat: :sparkles: component param

Pull Request - State: closed - Opened by marcodarko about 2 years ago

#52 - Adding logic to pick API server urls

Pull Request - State: closed - Opened by rjawesome about 2 years ago - 7 comments

#51 - API_LIST Behavior

Pull Request - State: closed - Opened by tokebe over 2 years ago

#50 - build(deps): bump semver-regex from 3.1.3 to 3.1.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#49 - build(deps): bump ejs from 3.1.6 to 3.1.8

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#48 - build(deps): bump minimist from 1.2.5 to 1.2.6

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#47 - build(deps): bump node-fetch from 2.6.1 to 2.6.7

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#46 - build(deps): bump shelljs from 0.8.4 to 0.8.5

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#45 - build(deps): bump follow-redirects from 1.14.1 to 1.14.8

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#44 - Support for API unavailability warning log

Pull Request - State: closed - Opened by tokebe over 2 years ago

#43 - feat: support annotated batchSize for ID chunking

Pull Request - State: closed - Opened by tokebe almost 3 years ago

#42 - fix: change infores-curie to infores in smartapi yamls

Pull Request - State: closed - Opened by colleenXu almost 3 years ago

#41 - Add support for templating-related operation annotations

Pull Request - State: closed - Opened by tokebe about 3 years ago

#40 - Fix #208: Update edge attributes

Pull Request - State: closed - Opened by ericz1803 about 3 years ago

#39 - fix wrong order of entities being parsed in metakg cnstruction

Pull Request - State: closed - Opened by marcodarko about 3 years ago - 6 comments

#38 - Fix #258: Update config list to use SmartAPI IDs instead of API name

Pull Request - State: closed - Opened by ericz1803 about 3 years ago

#37 - chore: update some badge links, ChemicalSubstance -> SmallMolecule

Pull Request - State: closed - Opened by colleenXu about 3 years ago

#36 - clean up cached smartapi_specs.json

Issue - State: closed - Opened by newgene about 3 years ago - 1 comment
Labels: enhancement

#35 - chore: rm unused dep jsnetworkx

Pull Request - State: closed - Opened by ariutta over 3 years ago

#34 - update URLs to biothings

Pull Request - State: closed - Opened by ariutta over 3 years ago

#33 - build(deps): bump hosted-git-info from 2.8.8 to 2.8.9

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#32 - build(deps): bump handlebars from 4.7.6 to 4.7.7

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#31 - build(deps): bump y18n from 4.0.0 to 4.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#30 - build(deps): bump node-notifier from 8.0.0 to 8.0.2

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#29 - Allow user to select only a few SmartAPIs to load based on titles

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#28 - Add loader class to support loading specs from only a subset APIs by their name

Issue - State: closed - Opened by kevinxin90 over 3 years ago
Labels: enhancement

#27 - Support get ops from local copy of /predicates

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#26 - Support passing a file of results from /predicates endpoint for parsing

Issue - State: closed - Opened by kevinxin90 over 3 years ago - 1 comment
Labels: enhancement

#25 - Add query_operations field for all TRAPI ops

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#24 - Add query_operations field for all TRAPI APIs

Issue - State: closed - Opened by kevinxin90 over 3 years ago
Labels: enhancement

#23 - Investigate potential issue regarding undefined server url

Issue - State: closed - Opened by kevinxin90 over 3 years ago - 1 comment

#22 - ci: :construction_worker: remove test in npm publish workflow

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#21 - remove npm test in publish workflow since test will be done during publish

Issue - State: closed - Opened by kevinxin90 over 3 years ago
Labels: enhancement

#20 - Include local copy of SmartAPI spec when compiling TypeScript code

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#19 - local smartapi_specs.json file not included when compiling typescript

Issue - State: closed - Opened by kevinxin90 over 3 years ago
Labels: bug

#18 - test: :white_check_mark: fix broken test due to SmartAPI registry change

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#17 - Fix broken test using Clinical Risk KP

Issue - State: closed - Opened by kevinxin90 over 3 years ago
Labels: bug

#16 - Generate bundle for browser

Pull Request - State: closed - Opened by ericz1803 over 3 years ago

#15 - Export to browser compatible format

Issue - State: closed - Opened by kevinxin90 over 3 years ago
Labels: bug

#14 - Fix issue 12

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#13 - update the local SmartAPI spec stored in smartapi-kg

Issue - State: closed - Opened by kevinxin90 over 3 years ago - 1 comment
Labels: bug

#12 - update SmartAPI API query url

Issue - State: closed - Opened by kevinxin90 over 3 years ago - 1 comment
Labels: bug

#11 - fix tslint errors

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#10 - ci: :construction_worker: set up github actions for ci testing

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#9 - set up github actions for ci testing and coverage

Issue - State: closed - Opened by kevinxin90 over 3 years ago - 1 comment
Labels: enhancement

#8 - Bump node-notifier from 8.0.0 to 8.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#7 - Bump ini from 1.3.5 to 1.3.7

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#6 - merge from kevinxin90 branch

Pull Request - State: closed - Opened by kevinxin90 over 3 years ago

#5 - fix tslint error

Issue - State: closed - Opened by kevinxin90 over 3 years ago - 2 comments
Labels: bug

#4 - Bump axios from 0.19.2 to 0.21.1

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#3 - Bump ini from 1.3.5 to 1.3.8

Pull Request - State: closed - Opened by dependabot[bot] almost 4 years ago - 1 comment
Labels: dependencies

#2 - Bump node-fetch from 2.6.0 to 2.6.1

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago
Labels: dependencies

#1 - Bump lodash from 4.17.15 to 4.17.19

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

GitHub / biothings/smartapi-kg.js issues and pull requests