Ecosyste.ms: Issues

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GitHub / biopet/ngs-utils issues and pull requests

#29 - enable functionality to not split contigs.

Pull Request - State: closed - Opened by rhpvorderman over 6 years ago

#28 - Add checkmate validation

Pull Request - State: closed - Opened by rhpvorderman over 6 years ago

#27 - Add validate reference in bam

Pull Request - State: closed - Opened by rhpvorderman over 6 years ago

#26 - Fixed codacy issues

Pull Request - State: closed - Opened by ffinfo over 6 years ago

#25 - Fixing codacy issues

Pull Request - State: closed - Opened by ffinfo over 6 years ago

#24 - Added option to not mix contigs

Pull Request - State: closed - Opened by ffinfo over 6 years ago

#23 - Fixing small bug with missing contigs

Pull Request - State: closed - Opened by ffinfo over 6 years ago

#22 - Added non_ref matrix

Pull Request - State: closed - Opened by ffinfo over 6 years ago

#21 - Added ref counts

Pull Request - State: closed - Opened by ffinfo over 6 years ago

#20 - Add contig based sorting to scatter

Pull Request - State: closed - Opened by DavyCats almost 7 years ago

#19 - Added cross build

Pull Request - State: closed - Opened by ffinfo almost 7 years ago

#18 - Index scattering

Pull Request - State: closed - Opened by ffinfo almost 7 years ago

#17 - Add subqueries that keeps the orinal positions

Pull Request - State: closed - Opened by ffinfo almost 7 years ago - 1 comment

#16 - Adding method

Pull Request - State: closed - Opened by ffinfo almost 7 years ago

#15 - Adding 2 bit conversion for small sequences

Pull Request - State: closed - Opened by ffinfo almost 7 years ago

#14 - Added encoding detection

Pull Request - State: closed - Opened by ffinfo almost 7 years ago

#13 - Fixing codacy issues

Pull Request - State: closed - Opened by ffinfo about 7 years ago - 2 comments

#12 - Switch to sbt 1.0.4

Pull Request - State: closed - Opened by ffinfo about 7 years ago - 2 comments

#11 - Update dependencies

Pull Request - State: closed - Opened by ffinfo about 7 years ago - 1 comment

#10 - Adding plugin

Pull Request - State: closed - Opened by ffinfo about 7 years ago - 2 comments

#9 - Adding a ped file parser

Pull Request - State: closed - Opened by ffinfo about 7 years ago - 7 comments

#8 - Add tests

Pull Request - State: closed - Opened by ffinfo about 7 years ago - 1 comment

#7 - Added genotype fields (and reformatted)

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 7 comments

#6 - Added case sensitive option to rebuild contig map

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 1 comment

#5 - Filter empty attributes

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 1 comment

#4 - Fix bug in parsing a gtf line

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 1 comment

#3 - Adding sample distributions

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 1 comment

#2 - Adding general stats classes

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 3 comments

#1 - Adding SampleCompare class to utils

Pull Request - State: closed - Opened by ffinfo over 7 years ago - 2 comments