Ecosyste.ms: Issues
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GitHub / biomodhub/biomod2 issues and pull requests
#510 - Question about variable importance - values of 1 or 0
Issue -
State: open - Opened by amythor about 16 hours ago
Labels: modeling question
#510 - Question about variable importance - values of 1 or 0
Issue -
State: open - Opened by amythor about 16 hours ago
Labels: modeling question
#509 - Question about scaling models
Issue -
State: closed - Opened by amythor 8 days ago
- 2 comments
Labels: modeling question
#508 - How does parallelization works?
Issue -
State: open - Opened by yuliaUU 11 days ago
- 2 comments
Labels: modeling question
#507 - Help with BIOMOD_FormatingData - [The function cannot form a database of species information and environmental information]
Issue -
State: open - Opened by liushuhao-666 14 days ago
- 2 comments
Labels: help wanted
#507 - Help with BIOMOD_FormatingData - [The function cannot form a database of species information and environmental information]
Issue -
State: closed - Opened by liushuhao-666 14 days ago
- 7 comments
Labels: help wanted
#506 - Understanding the cutoff ensemble calculation
Issue -
State: open - Opened by jacksonwr5798 14 days ago
- 8 comments
Labels: modeling question
#505 - Help with biomod2 4.2-6-1 resample during projection
Issue -
State: closed - Opened by zpmdal 21 days ago
- 2 comments
Labels: help wanted
#505 - Help with biomod2 4.2-6-1 resample during projection
Issue -
State: closed - Opened by zpmdal 21 days ago
- 2 comments
Labels: help wanted
#504 - BIOMOD_EnsembleForecasting: No output raster file writes in the harddisk
Issue -
State: open - Opened by Mountain-Horn 21 days ago
Labels: modeling question
#504 - BIOMOD_EnsembleForecasting: No output raster file writes in the harddisk
Issue -
State: open - Opened by Mountain-Horn 21 days ago
- 1 comment
Labels: modeling question
#503 - Fix typos following 'spelling::spell_check_package()'
Pull Request -
State: closed - Opened by Rekyt 22 days ago
#502 - Improvement for BIOMOD_4.2-5-2 - Explain error behind number of levels in categorical data for PA creation
Issue -
State: closed - Opened by gretacv 24 days ago
- 2 comments
Labels: enhancement
#501 - R biomod2 error in {: task 1 failed - "<text>:1:22: unexpected input
Issue -
State: open - Opened by Qingyiyaaa 24 days ago
- 15 comments
Labels: bug
#501 - R biomod2 error in {: task 1 failed - "<text>:1:22: unexpected input
Issue -
State: open - Opened by Qingyiyaaa 24 days ago
- 16 comments
Labels: bug
#500 - Error in BIOMOD_EnsembleForecasting: Error in { : task 9 failed - "task 1 failed - "[writeRaster] path does not exist""
Issue -
State: open - Opened by Irene131998 25 days ago
- 10 comments
Labels: help wanted
#498 - Question about generating AUC graph - How could I create it?
Issue -
State: open - Opened by gsatta about 1 month ago
- 2 comments
Labels: modeling question
#497 - Error in BIOMOD_EnsembleForecasting - Creating suitable Workdir... Error in { : task 1 failed - "NULL value passed as symbol address"
Issue -
State: open - Opened by chenyongpeng1 about 1 month ago
- 1 comment
Labels: bug
#496 - Help with BIOMOD Error in { : task 1 failed - "task 1 failed - "task 1 failed - "Unable to make model prediction"""
Issue -
State: open - Opened by WindWindLady about 1 month ago
- 7 comments
Labels: help wanted
#495 - Help with BIOMOD_4.2-6 -Error in { : task 6 failed - "cannot open the connection" In addition: Warning messages: 1: In file(con, "r") : cannot open file '/path/to/maxent.stderr': Permission denied
Issue -
State: open - Opened by zpmdal about 2 months ago
- 6 comments
Labels: help wanted
#494 - Help with BIOMOD_xxx - [short question here]
Issue -
State: open - Opened by saeedbehzadifard1376 about 2 months ago
- 2 comments
Labels: help wanted
#493 - Response Curve
Issue -
State: open - Opened by ShreePoudel0 about 2 months ago
- 1 comment
Labels: help wanted
#491 - Error in bm_tuning - Errore in { : task 1 failed - "task 1 failed - " names(user.val) must be...
Issue -
State: open - Opened by LorenzoBernicchi about 2 months ago
- 1 comment
Labels: bug
#491 - Error in bm_tuning - Errore in { : task 1 failed - "task 1 failed - " names(user.val) must be...
Issue -
State: closed - Opened by LorenzoBernicchi about 2 months ago
- 2 comments
Labels: bug
#490 - bm_PlotRangeSize:output interpretation
Issue -
State: closed - Opened by NadiaVic 2 months ago
- 3 comments
Labels: help wanted
#489 - bm_variableImportance
Issue -
State: open - Opened by ShreePoudel0 2 months ago
- 1 comment
Labels: help wanted
#488 - GBM overfitting maybe?
Issue -
State: open - Opened by ShreePoudel0 2 months ago
- 3 comments
Labels: modeling question
#488 - GBM overfitting maybe?
Issue -
State: open - Opened by ShreePoudel0 2 months ago
- 2 comments
Labels: modeling question
#487 - Help with BIOMOD_EnsembleForecasting - [Error: [rast] file does not exist]
Issue -
State: open - Opened by jmpayopay 2 months ago
- 1 comment
Labels: help wanted
#487 - Help with BIOMOD_EnsembleForecasting - [Error: [rast] file does not exist]
Issue -
State: open - Opened by jmpayopay 2 months ago
- 1 comment
Labels: help wanted
#486 - Problem with BIOMOD_formatting
Issue -
State: open - Opened by ShreePoudel0 2 months ago
- 5 comments
Labels: help wanted
#486 - Problem with BIOMOD_formatting
Issue -
State: open - Opened by ShreePoudel0 2 months ago
- 5 comments
Labels: help wanted
#485 - Help with BIOMOD_2-5-2 - Memory issue: Rstudio uses nearly all the memory, and is forced to stop (R4.4.1, RStudio: 2024.04.0, build 735)
Issue -
State: open - Opened by zpmdal 2 months ago
- 2 comments
Labels: help wanted
#485 - Help with BIOMOD_2-5-2 - Memory issue: Rstudio uses nearly all the memory, and is forced to stop (R4.4.1, RStudio: 2024.04.0, build 735)
Issue -
State: open - Opened by zpmdal 2 months ago
- 2 comments
Labels: help wanted
#484 - Error in BIOMOD_EnsembleModeling - Errore in { : "task 1 failed - "No control observation.""""
Issue -
State: closed - Opened by LorenzoBernicchi 2 months ago
- 7 comments
Labels: bug
#484 - Error in BIOMOD_EnsembleModeling - Errore in { : "task 1 failed - "No control observation.""""
Issue -
State: closed - Opened by LorenzoBernicchi 2 months ago
- 7 comments
Labels: bug
#483 - BIOMOD_ModelingOptions 4.2-5-2
Issue -
State: open - Opened by eragrostis 3 months ago
- 1 comment
Labels: bug
#482 - Question on cut-off value for binary transformation - How is calculated?
Issue -
State: open - Opened by Cam-in 3 months ago
- 3 comments
Labels: help wanted
#481 - Help with BIOMOD_4.2-5-2 - New "bm_ModelingOptions" function
Issue -
State: closed - Opened by guimaricato 3 months ago
- 14 comments
Labels: help wanted
#481 - Help with BIOMOD_4.2-5-2 - New "bm_ModelingOptions" function
Issue -
State: open - Opened by guimaricato 3 months ago
- 3 comments
Labels: help wanted
#480 - Help understanding parameter tuning in BIOMOD_Modeling
Issue -
State: closed - Opened by HRodenhizer 3 months ago
- 8 comments
Labels: help wanted
#479 - Help with BIOMOD_4.2-6 - In BIOMOD_Modeling run, some models don't work.
Issue -
State: open - Opened by gsatta 3 months ago
- 7 comments
Labels: help wanted
#478 - V4.2-6
Pull Request -
State: closed - Opened by HeleneBlt 3 months ago
#476 - Help with BIOMOD2_4.2-5 - Error in { : task 1 failed - "task 12 failed - "argomento non numerico passato ad un operatore binario""
Issue -
State: closed - Opened by gsatta 4 months ago
- 2 comments
Labels: help wanted
#475 - training set, validation set, and test set
Issue -
State: open - Opened by chenyongpeng1 4 months ago
- 3 comments
#474 - Issue with Low TSS Scores in Ensemble Modeling of Australian Bustard using Biomod2 ([email protected])
Issue -
State: closed - Opened by Saurav1227 4 months ago
- 2 comments
Labels: modeling question
#473 - Consistently Low TSS Scores on ensemble modeling of Australian Bustard in Australia ([email protected])
Issue -
State: closed - Opened by Saurav1227 4 months ago
Labels: modeling question
#473 - Consistently Low TSS Scores on ensemble modeling of Australian Bustard in Australia ([email protected])
Issue -
State: closed - Opened by Saurav1227 4 months ago
Labels: modeling question
#472 - Help with BIOMOD_FormatingData - setting different number of pseudo absences for different algorithms
Issue -
State: closed - Opened by LorenzoBernicchi 4 months ago
- 16 comments
Labels: help wanted
#472 - Help with BIOMOD_FormatingData - setting different number of pseudo absences for different algorithms
Issue -
State: open - Opened by LorenzoBernicchi 4 months ago
- 13 comments
Labels: help wanted
#471 - Tune "MAXENT" in the new version of biomod2
Issue -
State: closed - Opened by fdaccrombessi 4 months ago
- 5 comments
#470 - Help with environmental predictor raster input
Issue -
State: open - Opened by Friepei 4 months ago
- 7 comments
Labels: help wanted
#469 - Error in BIOMOD2 - [Error task 1 failed]
Issue -
State: open - Opened by federicalosacco 4 months ago
- 22 comments
Labels: bug
#468 - Help with BIOMOD2_4.2-5 . - Error in { : task 70 failed - "task 3 failed - "'threshold' can not be negative""
Issue -
State: closed - Opened by gsatta 4 months ago
- 4 comments
Labels: help wanted
#467 - Problem with future forecasting results (Unreasonable forecasting when assigning 2070 variable)
Issue -
State: closed - Opened by joshikp01 4 months ago
- 2 comments
Labels: help wanted
#467 - Problem with future forecasting results (Unreasonable forecasting when assigning 2070 variable)
Issue -
State: closed - Opened by joshikp01 4 months ago
- 2 comments
Labels: help wanted
#466 - Help with BIOMOD_FormatingData - [Problem with the number of presence after PA generation]
Issue -
State: closed - Opened by VDjianBiogeo 4 months ago
- 8 comments
Labels: help wanted
#465 - Help with "BIOMOD_EnsembleModeling" on different device
Issue -
State: closed - Opened by Haikalidris 4 months ago
- 6 comments
Labels: help wanted
#464 - Help with categorical data in biomod2
Issue -
State: closed - Opened by JurSeuren 4 months ago
- 5 comments
Labels: help wanted
#463 - Habitat suitability, is there any unit ?
Issue -
State: closed - Opened by lpittet92 4 months ago
- 1 comment
#462 - BIOMOD_Projection (future bioclim): [subset] invalid name(s)
Issue -
State: closed - Opened by Biomoduser 5 months ago
- 4 comments
Labels: modeling question
#461 - Modeling options not working
Issue -
State: open - Opened by ShreePoudel0 5 months ago
- 5 comments
Labels: help wanted
#460 - Unusual model evaluation (TSS/ROC) scores for biomod2...RF overfit ?
Issue -
State: closed - Opened by joshikp01 5 months ago
- 4 comments
Labels: modeling question
#460 - Unusual model evaluation (TSS/ROC) scores for biomod2...RF overfit ?
Issue -
State: closed - Opened by joshikp01 5 months ago
- 4 comments
Labels: modeling question
#459 - Error in BIOMOD_ModelingOptions
Issue -
State: open - Opened by SHANTIKUMARI12345 5 months ago
- 8 comments
Labels: help wanted
#457 - How do I re-run the output model results
Issue -
State: closed - Opened by MrShuaiB1 5 months ago
- 8 comments
Labels: modeling question
#456 - Error in BIOMOD_2 - [[rast] filename is empty. Provide a valid filename]
Issue -
State: open - Opened by GISilvia 5 months ago
- 4 comments
Labels: bug
#456 - Error in BIOMOD_2 - [[rast] filename is empty. Provide a valid filename]
Issue -
State: open - Opened by GISilvia 5 months ago
- 7 comments
Labels: bug
#455 - Error in { : task 2 failed - "task 1 failed - "task 1 failed - "object 'tuned.mod' not found"""
Issue -
State: open - Opened by colin123-tt 5 months ago
- 15 comments
Labels: bug
#454 - Can Biomod perform multispecies modeling predictions?
Issue -
State: closed - Opened by colin123-tt 5 months ago
- 1 comment
Labels: help wanted
#453 - Improvement for BIOMOD_xxx - [add ENFA/MaDiFA and SVM ]
Issue -
State: open - Opened by jaum20 5 months ago
- 1 comment
Labels: enhancement
#452 - Error in BIOMOD_EnsembleForecasting - [Error in .fun_testIfIn(TRUE, "full.name", subset.list[["full.name"]], : full.name must be 'value']
Issue -
State: closed - Opened by yinzheng128 5 months ago
- 1 comment
Labels: bug
#451 - Biomod projection for Climate Change
Issue -
State: closed - Opened by ShreePoudel0 5 months ago
- 3 comments
Labels: help wanted
#450 - Help with BIOMOD_FormatingData.
Issue -
State: closed - Opened by mengjiezhang4ds 5 months ago
- 4 comments
Labels: help wanted
#449 - Question about Response Curves - hide model names
Issue -
State: closed - Opened by JurSeuren 5 months ago
- 2 comments
Labels: modeling question
#448 - Error in BIOMOD_Modeling: Error in { : task 27 failed - "cannot open the connection"
Issue -
State: closed - Opened by LorenzoBernicchi 5 months ago
- 13 comments
Labels: bug
#447 - Help needed with Modeling process
Issue -
State: closed - Opened by ShreePoudel0 5 months ago
- 4 comments
Labels: help wanted
#446 - bm_CrossValidation
Issue -
State: closed - Opened by ShreePoudel0 5 months ago
- 1 comment
Labels: modeling question
#445 - Can't do BIOMOD_EnsembleForecasting after moving models to a new loctaion
Issue -
State: closed - Opened by yuliaUU 6 months ago
- 4 comments
Labels: bug
#444 - Error in BIOMOD_EnsembleModeling - [Creation of a new empty directory]
Issue -
State: closed - Opened by VDjianBiogeo 6 months ago
- 7 comments
Labels: bug
#443 - Error in BIOMOD_Projection - [writeRaster error at the end of projection]
Issue -
State: closed - Opened by VDjianBiogeo 6 months ago
- 4 comments
Labels: bug
#441 - TSS of RF and GAM return 1
Issue -
State: closed - Opened by ShreePoudel0 6 months ago
- 1 comment
Labels: modeling question
#440 - Unexpected results for `em.algo = "EMci"`
Issue -
State: closed - Opened by kenkellner 6 months ago
- 2 comments
Labels: help wanted
#439 - Question about BIOMOD_FormatingData()
Issue -
State: closed - Opened by woaichixuegao 6 months ago
- 2 comments
Labels: modeling question
#438 - Error in {:task 2 failed-"std::bad_a11oc' When I run projection for ensmbleforecasting building single projections
Issue -
State: closed - Opened by QianjiangLi 7 months ago
- 4 comments
Labels: bug
#436 - Algorithms selection for moddeling involving cathegorical and continuous variables
Issue -
State: open - Opened by AWys0cki 7 months ago
- 2 comments
Labels: modeling question
#435 - Error when trying to plot model evaluation scores.
Issue -
State: closed - Opened by Arjunpal96 7 months ago
- 3 comments
Labels: modeling question
#434 - Weird results for ROC/TSS
Issue -
State: open - Opened by HeleneBlt 7 months ago
- 6 comments
#433 - Error in BIOMOD_EnsembleModeling - [cannot open connection when dir.name in BIOMOD_FormattingData is a path]
Issue -
State: closed - Opened by hancock-da 7 months ago
- 1 comment
Labels: bug
#432 - Ensemble models scores are lower than single models scores.
Issue -
State: closed - Opened by LorenzoBernicchi 7 months ago
- 4 comments
Labels: modeling question
#431 - Help need with get_Evaluations function
Issue -
State: closed - Opened by ShreePoudel0 7 months ago
- 1 comment
Labels: help wanted
#430 - Tuned XGBOOST model Error - BIOMOD version 4.2-5
Issue -
State: closed - Opened by suicmezburak 7 months ago
- 2 comments
#429 - Help with BIOMOD_4.2.5 - [how to modify s4 class from biomod2; bm_PlotResponseCurves]
Issue -
State: closed - Opened by ozgurhsyndgn 7 months ago
- 2 comments
Labels: help wanted
#428 - Need Help! Questions about "myBiomodData <- BIOMOD_FormatingData(......)"
Issue -
State: closed - Opened by 691362 7 months ago
- 2 comments
Labels: modeling question
#427 - Need Help!Model result evaluation- Response Curves and the threshold value of the probability of presence
Issue -
State: closed - Opened by TY-dispersal 7 months ago
- 2 comments
Labels: modeling question
#426 - NEED HELP!There is something wrong with the results projected onto future variables
Issue -
State: closed - Opened by AlilLearner 7 months ago
- 2 comments
Labels: modeling question
#425 - Error in BIOMOD_xxx - [Error in BIOMOD_EnsembleModeling "rgedRun_mergedAlgo.predictions', probable reason 'No such file or directory' " ]
Issue -
State: closed - Opened by silveiratcl 7 months ago
- 2 comments
Labels: bug
#424 - Help with building MAXENT model on HPC
Issue -
State: closed - Opened by WeiyeHuang 7 months ago
- 2 comments
Labels: help wanted
#423 - Parallel processing on Maxent tuning: using all cores
Issue -
State: closed - Opened by haglad 7 months ago
- 7 comments
Labels: help wanted
#422 - filtered.method - Values below threshold always 0? Also, what is the difference between filtered.method and binary.meth?
Issue -
State: closed - Opened by luispedrosantiago 7 months ago
- 6 comments
Labels: modeling question