Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bioinfodlsu/rice-pilaf issues and pull requests

#62 - Update show gene list to include gene description

Pull Request - State: closed - Opened by anishmss about 1 year ago

#61 - Generate module graphs on the fly

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#60 - Handle no enriched modules gracefully

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#59 - Reset coexpression network when new genomic interval is submitted

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#58 - Create help page and integrate RCRN

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#57 - Added QTL on anaerobic germination and fixed bug re: slider

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#54 - Taper parameter space for module detection algorithms

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#53 - Create Python dependencies file for workflow

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#52 - Update tfbs -- allow any choice of prediction technique and binding s…

Pull Request - State: closed - Opened by anishmss about 1 year ago

#51 - Refactor layout of Dash pages

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#50 - Tfbs

Pull Request - State: closed - Opened by anishmss about 1 year ago

#49 - Fix issue with navbar

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#48 - Remove igv folder and revise Dockerization file

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#47 - Refactor code and bundle dependency installation files

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#46 - Add descriptions of module detection algorithms

Pull Request - State: closed - Opened by memgonzales about 1 year ago

#45 - Fix session in lift-over table and Fix UI

Pull Request - State: closed - Opened by pbong over 1 year ago

#44 - Fix default value of tfbs radio input

Pull Request - State: closed - Opened by pbong over 1 year ago

#43 - Browse Loci Input

Pull Request - State: closed - Opened by pbong over 1 year ago

#42 - Transfer cultivars to lift-over and add example genomic intervals

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#41 - Tfbs

Pull Request - State: closed - Opened by anishmss over 1 year ago

#40 - Input

Pull Request - State: closed - Opened by pbong over 1 year ago

#39 - Fix capitalization for TFBS

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#38 - Display loading affordance only when necessary

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#37 - Prettify UI and partially implement sessions for coexpression

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#36 - Revamp UI components

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#35 - Revise recipes for module detection algos and style tables

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#34 - Input

Pull Request - State: closed - Opened by pbong over 1 year ago

#33 - Dockerize the app

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#32 - Prettify display of enrichment analysis results

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#31 - igv tracks + reset

Pull Request - State: closed - Opened by pbong over 1 year ago

#30 - Display ontology enrichment analysis results

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#29 - Input

Pull Request - State: closed - Opened by pbong over 1 year ago

#27 - lift-over Input & igv write to file code

Pull Request - State: closed - Opened by pbong over 1 year ago

#26 - Restructure file directories

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#25 - Display enriched modules along with ontology and pathway information

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#24 - IGV

Pull Request - State: closed - Opened by pbong over 1 year ago

#23 - Implement ontology and pathway enrichment analysis

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#22 - Display igv according to dropdown value

Pull Request - State: closed - Opened by pbong over 1 year ago

#21 - Restructure directory containing data preparation scripts

Pull Request - State: closed - Opened by memgonzales over 1 year ago

#20 - Create class for the centralized declaration of file paths

Pull Request - State: closed - Opened by memgonzales over 1 year ago