Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / bioinfo-chru-strasbourg/stark issues and pull requests
#35 - Rnaseq
Pull Request -
State: closed - Opened by SamuelNicaise about 1 year ago
#35 - Rnaseq
Pull Request -
State: closed - Opened by SamuelNicaise about 1 year ago
#34 - clean outlyzer url with correct release
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#34 - clean outlyzer url with correct release
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#33 - fix outlyzer adding script in sources
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#33 - fix outlyzer adding script in sources
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#32 - fix outlyzer 3.2
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#32 - fix outlyzer 3.2
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#31 - fix Dockerfile, clean main rules mk, fix setup
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#31 - fix Dockerfile, clean main rules mk, fix setup
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#30 - change root .env release
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#30 - change root .env release
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#29 - Switch almalinux
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#29 - Switch almalinux
Pull Request -
State: closed - Opened by antonylebechec over 1 year ago
#28 - Setup script error: docker "STARK" project in upper
Issue -
State: open - Opened by antonylebechec over 1 year ago
Labels: bug
#28 - Setup script error: docker "STARK" project in upper
Issue -
State: open - Opened by antonylebechec over 1 year ago
Labels: bug
#27 - STARK 18.5 update
Pull Request -
State: closed - Opened by bioinfo-chru-strasbourg over 1 year ago
#27 - STARK 18.5 update
Pull Request -
State: closed - Opened by bioinfo-chru-strasbourg over 1 year ago
#26 - Automatically stop STARK when encountering an error
Issue -
State: open - Opened by SamuelNicaise over 1 year ago
#26 - Automatically stop STARK when encountering an error
Issue -
State: open - Opened by SamuelNicaise over 1 year ago
#25 - change release notes, and docs in MarkDown
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#25 - change release notes, and docs in MarkDown
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#24 - improve IGV session, improve analysis log #23
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#24 - improve IGV session, improve analysis log #23
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#23 - Improve IGV sessions
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 1 comment
Labels: enhancement, low-priority
#23 - Improve IGV sessions
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 1 comment
Labels: enhancement, low-priority
#22 - Runmetrics ram
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#22 - Runmetrics ram
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#21 - fix fix vcf header script
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#21 - fix fix vcf header script
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#20 - Fix vcf header comma description
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#20 - Fix vcf header comma description
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#19 - Docs and release
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#19 - Docs and release
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#18 - add fix vcf header script
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#18 - add fix vcf header script
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#17 - Add INFO to FORMAT, add threads to bcftools
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#17 - Add INFO to FORMAT, add threads to bcftools
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#16 - Add pipeline-specific rule loading
Pull Request -
State: closed - Opened by SamuelNicaise almost 2 years ago
#16 - Add pipeline-specific rule loading
Pull Request -
State: closed - Opened by SamuelNicaise almost 2 years ago
#15 - Launching the analysis with STARK
Issue -
State: open - Opened by Nour-EddineS almost 2 years ago
- 1 comment
#15 - Launching the analysis with STARK
Issue -
State: open - Opened by Nour-EddineS almost 2 years ago
- 1 comment
#14 - Add INFO annotations on Genotype/FORMAT for Sample final VCF
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 1 comment
Labels: enhancement
#14 - Add INFO annotations on Genotype/FORMAT for Sample final VCF
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 1 comment
Labels: enhancement
#13 - Fix and improve #6 #11 #12
Pull Request -
State: closed - Opened by antonylebechec almost 2 years ago
#12 - STARK modules management
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 1 comment
Labels: enhancement
#11 - Docker compose command fix
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 2 comments
Labels: bug
#10 - Standardize Python installations
Issue -
State: closed - Opened by SamuelNicaise almost 2 years ago
- 1 comment
Labels: low-priority
#9 - Improve rule loading
Issue -
State: closed - Opened by SamuelNicaise almost 2 years ago
- 1 comment
#8 - Improve RAM usage for demanding rules
Issue -
State: closed - Opened by SamuelNicaise almost 2 years ago
- 1 comment
#7 - Install STARK on Virtual machine
Issue -
State: open - Opened by antonylebechec almost 2 years ago
- 2 comments
Labels: good first issue
#6 - Fix module name case on services script
Issue -
State: closed - Opened by antonylebechec almost 2 years ago
- 1 comment
Labels: bug
#5 - Failed to start all services modules
Issue -
State: closed - Opened by VironicaZ almost 2 years ago
- 24 comments
#4 - Error in running STARK (proxy configuration issue)
Issue -
State: closed - Opened by Nour-EddineS almost 2 years ago
- 6 comments
#3 - [CuteVariant] Generate CuteVariant DB for analysis
Issue -
State: open - Opened by antonylebechec over 2 years ago
Labels: enhancement
#2 - [GATK4] Add rules using GATK4
Issue -
State: open - Opened by antonylebechec over 2 years ago
Labels: enhancement
#1 - [Analysis VCF] bug on samples' VCF merge
Issue -
State: closed - Opened by antonylebechec over 2 years ago
- 1 comment
Labels: bug