Ecosyste.ms: Issues

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GitHub / bioforensics/MicroHapDB issues and pull requests

#56 - Add I_n (informativeness for assignment) to marker table

Pull Request - State: closed - Opened by standage about 5 years ago
Labels: enhancement, datasources

#55 - MH frequency estimates based on 1KGP data

Pull Request - State: closed - Opened by standage about 5 years ago - 1 comment
Labels: enhancement

#54 - Update "lab designator" for Puente/Phillips markers

Pull Request - State: closed - Opened by standage about 5 years ago - 1 comment
Labels: datasources

#53 - Configure Codecov for CI build

Pull Request - State: closed - Opened by standage about 5 years ago

#52 - New defaults for delta/minlength params

Pull Request - State: closed - Opened by standage about 5 years ago
Labels: enhancement

#51 - Add Codecov.io integration

Issue - State: closed - Opened by standage about 5 years ago - 1 comment
Labels: enhancement, testing

#50 - New defaults for --delta and --min-length

Issue - State: closed - Opened by standage about 5 years ago
Labels: enhancement

#49 - Large-scale ID panel from de la Puente, Phillips, et al 2020 paper

Pull Request - State: closed - Opened by standage about 5 years ago
Labels: datasources

#48 - Add "no truncate" mode for marker tabular output

Pull Request - State: closed - Opened by standage about 5 years ago

#47 - 10 markers from Voskoboinik et al 2018

Pull Request - State: closed - Opened by standage about 5 years ago
Labels: datasources

#46 - Update variant IDs

Pull Request - State: closed - Opened by standage about 5 years ago
Labels: bug, datasources

#45 - Integrate 1000 Genomes Project population definitions

Pull Request - State: closed - Opened by standage about 5 years ago
Labels: datasources, refactoring

#44 - Map 1KG pop IDs to ALFRED pop IDs

Issue - State: closed - Opened by standage about 5 years ago
Labels: datasources

#43 - Check and fix rsIDs

Issue - State: closed - Opened by standage about 5 years ago - 1 comment
Labels: bug, datasources

#42 - Estimate allele frequencies for 26 populations from 1000 Genomes Project data

Issue - State: closed - Opened by standage over 5 years ago
Labels: enhancement, datasources

#41 - Drop pytest as an install dependency

Issue - State: closed - Opened by standage over 5 years ago

#40 - Discontinue Travis CI build

Issue - State: closed - Opened by standage over 5 years ago
Labels: testing

#39 - Include coordinates for both GRCh37 and GRCh38

Issue - State: closed - Opened by standage over 5 years ago - 5 comments
Labels: enhancement

#38 - Troubleshoot Github actions config

Pull Request - State: closed - Opened by standage over 5 years ago

#37 - Configure Github actions and build status badge

Pull Request - State: closed - Opened by standage over 5 years ago

#36 - Migrate some functionality from MicroHapulator

Pull Request - State: closed - Opened by standage over 5 years ago

#35 - Update Fasta deflines

Pull Request - State: closed - Opened by standage over 5 years ago

#34 - Fasta marker output for panel design

Pull Request - State: closed - Opened by standage over 5 years ago

#33 - Fix copy/paste error in detail output

Pull Request - State: closed - Opened by standage over 5 years ago

#32 - Add Chen 2019 microhap data

Pull Request - State: closed - Opened by standage over 5 years ago

#31 - Additional source of microhap data (Hiroaki et al 2015)

Pull Request - State: closed - Opened by standage over 5 years ago

#29 - Replace static examples with screen captures

Pull Request - State: closed - Opened by standage over 5 years ago

#28 - Document PermID

Issue - State: closed - Opened by standage over 5 years ago

#27 - Update DB build

Pull Request - State: closed - Opened by standage over 5 years ago

#26 - Modularize the DB build

Issue - State: closed - Opened by standage over 5 years ago - 1 comment

#24 - Additional sources of microhaplotypes

Issue - State: closed - Opened by standage over 5 years ago
Labels: datasources