Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / biocore/q2-qemistree issues and pull requests

#59 - Integrate network generation

Issue - State: closed - Opened by mwang87 over 5 years ago
Labels: wontfix

#58 - Meta update

Pull Request - State: closed - Opened by anupriyatripathi over 5 years ago
Labels: duplicate

#57 - Meta update

Pull Request - State: closed - Opened by anupriyatripathi over 5 years ago - 2 comments

#56 - save canopus fingerprints in the csifingerID step

Issue - State: open - Opened by anupriyatripathi over 5 years ago
Labels: enhancement

#55 - use biom for _match.py

Issue - State: open - Opened by anupriyatripathi over 5 years ago
Labels: enhancement, good first issue

#54 - save zodiac summary file

Issue - State: closed - Opened by anupriyatripathi over 5 years ago - 1 comment

#53 - module for meta analyses

Pull Request - State: closed - Opened by anupriyatripathi over 5 years ago - 1 comment

#52 - module to create tree when structure is known

Issue - State: open - Opened by anupriyatripathi almost 6 years ago
Labels: enhancement

#51 - Addition of a module to create a molecular network output adjacency list

Pull Request - State: closed - Opened by mwang87 almost 6 years ago

#50 - module to check mgf file format

Issue - State: closed - Opened by anupriyatripathi almost 6 years ago
Labels: enhancement

#49 - fingerprints & tree for GC data

Issue - State: closed - Opened by anupriyatripathi almost 6 years ago - 1 comment
Labels: enhancement

#48 - updating user documentation

Pull Request - State: closed - Opened by anupriyatripathi almost 6 years ago - 1 comment

#47 - probabilistic fingerprints

Pull Request - State: closed - Opened by anupriyatripathi almost 6 years ago - 2 comments

#46 - WIP Split sirius

Pull Request - State: closed - Opened by anupriyatripathi almost 6 years ago - 2 comments

#45 - ENH: Add ionization mode flag to fingerprint

Pull Request - State: closed - Opened by ElDeveloper almost 6 years ago - 3 comments

#44 - Describe handling of temporary directory

Issue - State: open - Opened by ElDeveloper almost 6 years ago - 1 comment

#43 - Add parameter for ionization mode

Issue - State: closed - Opened by ElDeveloper about 6 years ago

#42 - make classyfire predictions

Issue - State: closed - Opened by anupriyatripathi about 6 years ago

#41 - save csi fingerid summaries

Issue - State: closed - Opened by anupriyatripathi about 6 years ago - 1 comment

#40 - TST: Fix failing tests

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago - 1 comment

#39 - Add error handling in the subprocess execution

Issue - State: open - Opened by ElDeveloper about 6 years ago

#37 - module to merge collated fingerprints table

Issue - State: closed - Opened by anupriyatripathi about 6 years ago - 1 comment

#36 - update documentation

Issue - State: closed - Opened by anupriyatripathi about 6 years ago - 1 comment

#35 - Matchupdate

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago - 2 comments

#34 - ENH: Add a parameter to modify the jvm's flags

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago - 1 comment

#33 - allow users to save SIRIUS outputs

Issue - State: closed - Opened by anupriyatripathi about 6 years ago

#31 - thresholds for different instruments

Issue - State: closed - Opened by anupriyatripathi about 6 years ago

#30 - Control jvm environment variables

Issue - State: closed - Opened by ElDeveloper about 6 years ago

#29 - implement tip aggregation

Issue - State: open - Opened by anupriyatripathi about 6 years ago
Labels: enhancement

#28 - collation module WIP

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago - 2 comments

#27 - Allow users to collate SIRIUS' outputs

Issue - State: closed - Opened by ElDeveloper about 6 years ago - 1 comment

#26 - update batch url and add travis badge

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago - 1 comment

#25 - Install

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago

#24 - Install instructions and demo data

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago - 3 comments

#23 - TST: Add tests for plugin instantiation

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago - 1 comment

#22 - Add --processors flag to fingerprint identification

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago

#21 - Add coveragerc file

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago - 3 comments

#20 - Add tests of plugin instantiation

Issue - State: closed - Opened by ElDeveloper about 6 years ago

#19 - travis checks

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago - 1 comment

#18 - make make_hierarchy faster

Issue - State: closed - Opened by anupriyatripathi about 6 years ago

#17 - stylistic updates

Issue - State: closed - Opened by anupriyatripathi about 6 years ago

#16 - Add parallelization parameters to all the sirius commands

Issue - State: closed - Opened by ElDeveloper about 6 years ago

#15 - document all exceptions

Issue - State: closed - Opened by anupriyatripathi about 6 years ago

#14 - Match features WIP

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago - 1 comment

#13 - correcting param name

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago

#12 - BUG: Fix a few problems with the plugin

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago

#11 - add param choices for sirius

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago

#10 - Adds the plugin configuration for the two methods

Pull Request - State: closed - Opened by ElDeveloper about 6 years ago

#9 - adding make hierarchy, fingerprinting modules & associated tests

Pull Request - State: closed - Opened by anupriyatripathi about 6 years ago

#8 - conda sirius installation

Issue - State: open - Opened by anupriyatripathi over 6 years ago
Labels: help wanted, good first issue

#7 - methodological and runtime benchmarks

Issue - State: closed - Opened by anupriyatripathi over 6 years ago

#6 - installation instructions

Issue - State: closed - Opened by anupriyatripathi over 6 years ago - 1 comment

#5 - create examples and tutorial

Issue - State: closed - Opened by anupriyatripathi over 6 years ago - 1 comment

#4 - outline entire workflow

Issue - State: closed - Opened by anupriyatripathi over 6 years ago - 1 comment

#3 - define methods

Issue - State: closed - Opened by anupriyatripathi over 6 years ago

#2 - define input files

Issue - State: closed - Opened by anupriyatripathi over 6 years ago

#1 - setting up project structure

Pull Request - State: closed - Opened by anupriyatripathi over 6 years ago