biocore/my-microbes issues and pull requests

#100 - Added main index page.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#100 - Added main index page.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#99 - Fixed typos in beta diversity and OTU glossary entries.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#99 - Fixed typos in beta diversity and OTU glossary entries.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#98 - fix typos in OTU and beta diversity definition dialogs

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#98 - fix typos in OTU and beta diversity definition dialogs

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#97 - make the format.py unit tests less strict about specific text

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#97 - make the format.py unit tests less strict about specific text

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#96 - Taxa summaries are now made compatible before creating plots.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#96 - Taxa summaries are now made compatible before creating plots.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#95 - Change HTML links to open a new tab

Pull Request - State: closed - Opened by ElDeveloper about 12 years ago

#95 - Change HTML links to open a new tab

Pull Request - State: closed - Opened by ElDeveloper about 12 years ago

#94 - Added glossary of technical terms.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 1 comment

#94 - Added glossary of technical terms.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 1 comment

#93 - Issue 70

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#93 - Issue 70

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#92 - added text on two PCoA plots

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#92 - added text on two PCoA plots

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#91 - Open a new tab for each visualization

Issue - State: closed - Opened by ElDeveloper about 12 years ago - 6 comments

#91 - Open a new tab for each visualization

Issue - State: closed - Opened by ElDeveloper about 12 years ago - 6 comments

#90 - add text on potential issues with KiNG plots

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#90 - add text on potential issues with KiNG plots

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#89 - Accordion widget is now used instead of tabs.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#89 - Accordion widget is now used instead of tabs.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#88 - mouse-over definitions of terms

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 4 comments

#88 - mouse-over definitions of terms

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 4 comments

#87 - Text updates

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#87 - Text updates

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#86 - Added beta diversity pcoa plots without time series axis

Pull Request - State: closed - Opened by johnchase about 12 years ago

#86 - Added beta diversity pcoa plots without time series axis

Pull Request - State: closed - Opened by johnchase about 12 years ago

#85 - Added option to use existing rarefied/split tables.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#85 - Added option to use existing rarefied/split tables.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#84 - Change UI to use accordion instead of tabs

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment

#84 - Change UI to use accordion instead of tabs

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment

#83 - Added parameter file path option to personal_results

Pull Request - State: closed - Opened by johnchase about 12 years ago

#83 - Added parameter file path option to personal_results

Pull Request - State: closed - Opened by johnchase about 12 years ago

#82 - compare_taxa_summaries.py needs to be run

Issue - State: closed - Opened by jairideout about 12 years ago
Labels: bug

#82 - compare_taxa_summaries.py needs to be run

Issue - State: closed - Opened by jairideout about 12 years ago
Labels: bug

#81 - Fixes for IE.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#81 - Fixes for IE.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#80 - less text on individual pages

Issue - State: open - Opened by gregcaporaso about 12 years ago - 1 comment

#80 - less text on individual pages

Issue - State: open - Opened by gregcaporaso about 12 years ago - 1 comment

#79 - link to some natural history information about taxa

Issue - State: open - Opened by gregcaporaso about 12 years ago

#79 - link to some natural history information about taxa

Issue - State: open - Opened by gregcaporaso about 12 years ago

#78 - summary text about the project for top-level index page

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 3 comments

#78 - summary text about the project for top-level index page

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 3 comments

#77 - rename tabs for accessibility to users

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#77 - rename tabs for accessibility to users

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#76 - Improve general accessibility of system

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment

#76 - Improve general accessibility of system

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment

#75 - Add script options for rarefied and split OTU tables.

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#75 - Add script options for rarefied and split OTU tables.

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#74 - Added dual-layout support to comparative taxa summary plots.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#74 - Added dual-layout support to comparative taxa summary plots.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#73 - text for the top-level index page

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 2 comments

#73 - text for the top-level index page

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 2 comments

#72 - Provides access to representative sequences in OTU category significance tables.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 1 comment

#72 - Provides access to representative sequences in OTU category significance tables.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 1 comment

#71 - Include more in-depth explanation of OTUs?

Issue - State: closed - Opened by jairideout about 12 years ago - 3 comments
Labels: question

#70 - Include explanations for chao1 and shannon?

Issue - State: closed - Opened by jairideout about 12 years ago - 4 comments
Labels: question

#70 - Include explanations for chao1 and shannon?

Issue - State: closed - Opened by jairideout about 12 years ago - 4 comments
Labels: question

#69 - Updated alpha rarefaction text to reference menus.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 3 comments

#69 - Updated alpha rarefaction text to reference menus.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 3 comments

#68 - Fixed alpha diversity metric labels to be titles.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 1 comment

#68 - Fixed alpha diversity metric labels to be titles.

Pull Request - State: closed - Opened by jairideout about 12 years ago - 1 comment

#67 - Rarefied OTU table is now split only once (performance improvement).

Pull Request - State: closed - Opened by jairideout about 12 years ago

#67 - Rarefied OTU table is now split only once (performance improvement).

Pull Request - State: closed - Opened by jairideout about 12 years ago

#66 - Alpha rarefaction plots - documentation improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#66 - Alpha rarefaction plots - documentation improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#65 - Add representative sequence for each OTU in otu_category_significance.py tables

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#64 - Alpha diversity boxplots - axis label improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#64 - Alpha diversity boxplots - axis label improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#63 - Beta diversity improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 5 comments
Labels: enhancement, question

#63 - Beta diversity improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 5 comments
Labels: enhancement, question

#62 - Taxa summary plots - x-axis tick spacing

Issue - State: closed - Opened by jairideout about 12 years ago - 3 comments
Labels: question

#61 - Taxa summary plots - compare self at different body sites

Issue - State: open - Opened by jairideout about 12 years ago - 4 comments
Labels: enhancement

#61 - Taxa summary plots - compare self at different body sites

Issue - State: open - Opened by jairideout about 12 years ago - 4 comments
Labels: enhancement

#60 - self vs. other taxa summary plots - UI improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#60 - self vs. other taxa summary plots - UI improvements

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#59 - split_otu_table.py optimization

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#58 - single_rarefaction.py is now run only once.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#57 - More unit tests.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#56 - test on IE

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment

#55 - single_rarefaction.py optimization

Issue - State: closed - Opened by jairideout about 12 years ago - 1 comment
Labels: enhancement

#54 - Fixed broken unit tests.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#53 - Add explicit time axis for beta diversity plots

Pull Request - State: closed - Opened by ElDeveloper about 12 years ago

#52 - fix for issue 50

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#51 - Issue 38

Pull Request - State: closed - Opened by johnchase about 12 years ago

#50 - color rows in otu category significance table to indicate direction of difference

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 2 comments

#49 - fix for Issue 46

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#48 - Issue 39 - descriptive text updated

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#47 - Added unit tests, more refactoring, and some minor cleanup of code.

Pull Request - State: closed - Opened by jairideout about 12 years ago

#46 - otu category significance google links should only contain the name following the double underscore

Issue - State: closed - Opened by gregcaporaso about 12 years ago - 1 comment

#45 - fix for issue #44

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#44 - create support_data directory for storing files that are run-specific, but useful to keep under version control

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#43 - updates to default prefs file

Pull Request - State: closed - Opened by gregcaporaso about 12 years ago

#42 - error in pref files prevents us from changing the color of oral samples

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#41 - improve color choices for self v other PCoA and alpha rarefaction

Issue - State: closed - Opened by gregcaporaso about 12 years ago

#40 - Miscellaneous fixes

Pull Request - State: closed - Opened by jairideout about 12 years ago

#39 - finalize text for first delivery

Issue - State: closed - Opened by jairideout about 12 years ago - 2 comments
Labels: enhancement

GitHub / biocore/my-microbes issues and pull requests