Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / billdenney/pknca issues and pull requests
#367 - Missing value imputed for time
Issue -
State: open - Opened by billdenney 11 days ago
#366 - Increasing Testing Coverage (revision)
Pull Request -
State: closed - Opened by DBartlettHP 23 days ago
- 3 comments
#365 - Add code coverage for `superposition.R`
Issue -
State: open - Opened by DBartlettHP 23 days ago
#364 - Increasing Testing Coverage #2
Pull Request -
State: closed - Opened by DBartlettHP 25 days ago
#363 - Make AUCiv testing quieter; verify expected warnings
Pull Request -
State: closed - Opened by billdenney 27 days ago
#362 - Add unit column definitions to `PKNCAconc()` and `PKNCAdose()`
Pull Request -
State: closed - Opened by billdenney 28 days ago
#361 - Test all imputation methods for all concentrations are NA, all times are NA, all concentrations are 0
Issue -
State: open - Opened by billdenney 28 days ago
#360 - Remove extra calls to clean.conc.blq() and clean.conc.na()
Pull Request -
State: closed - Opened by billdenney 28 days ago
#359 - Remove extraneous calls to PKNCA.choose.option for "conc.blq"
Issue -
State: closed - Opened by billdenney 28 days ago
#358 - The same exclusion reason can be included multiple times
Issue -
State: closed - Opened by billdenney 28 days ago
- 1 comment
#357 - Increase code coverage
Pull Request -
State: closed - Opened by DBartlettHP 28 days ago
- 2 comments
#356 - Update CI
Pull Request -
State: closed - Opened by billdenney 28 days ago
#355 - c0 calculations that are missing the dose time now have a reason for exclusion added
Pull Request -
State: closed - Opened by billdenney 28 days ago
#354 - `Error with interval start=0, end=Inf: !any(is.na(conc)) is not TRUE` when t=0 is not NA
Issue -
State: closed - Opened by billdenney 28 days ago
- 1 comment
#353 - `Error with interval start=0, end=Inf: !any(is.na(conc)) is not TRUE` when t=0 is NA
Issue -
State: closed - Opened by billdenney 28 days ago
#352 - Fix IV bolus calculations not to require time = 0
Issue -
State: open - Opened by billdenney 28 days ago
#351 - Feature request: New logslope & c1 impute_start methods #350
Pull Request -
State: open - Opened by Gero1999 28 days ago
#350 - Feature request: New logslope & c1 impute_start methods
Issue -
State: open - Opened by Gero1999 28 days ago
- 3 comments
#348 - auc, c0 use different parameter names in different administration routes
Issue -
State: open - Opened by fyy897854960 about 1 month ago
- 1 comment
#347 - Feature Request: Automatic Outlier Detection
Issue -
State: closed - Opened by DBartlettHP about 2 months ago
- 1 comment
#346 - Clean.conc.blq tmax
Pull Request -
State: closed - Opened by billdenney about 2 months ago
#345 - Missing `time.dose` in `pk.calc.c0()` will not cause an error
Pull Request -
State: closed - Opened by billdenney about 2 months ago
#344 - `pk.calc.c0` has an error when `time.dose=NA`
Issue -
State: closed - Opened by billdenney about 2 months ago
#343 - clean.conc.blq: feats for tmax reference and default keep
Issue -
State: closed - Opened by billdenney about 2 months ago
- 4 comments
#342 - Feature request: Get fit from half-life calculation
Issue -
State: open - Opened by billdenney about 2 months ago
- 1 comment
#341 - clean.conc.blq: feats for tmax reference
Pull Request -
State: closed - Opened by Gero1999 about 2 months ago
- 4 comments
#339 - Return fit info from half.life calculation
Pull Request -
State: closed - Opened by roninsightrx about 2 months ago
- 10 comments
#338 - [WIP] return individual fit info, first version
Pull Request -
State: closed - Opened by roninsightrx about 2 months ago
#337 - An option to include R-squared with adj R-squared when choosing lambda_z_n
Issue -
State: open - Opened by cahn88 2 months ago
- 1 comment
#336 - Add unit column specification to `PKNCAconc()` and `PKNCAdose()` to automate unit addition to `PKNCAdata()`
Issue -
State: closed - Opened by billdenney 2 months ago
#335 - Creation of functions to set intervals after verification
Pull Request -
State: closed - Opened by DBartlettHP 3 months ago
- 10 comments
#333 - Update continuous integration
Pull Request -
State: closed - Opened by billdenney 3 months ago
#332 - Achieve 100% code coverage
Issue -
State: open - Opened by billdenney 3 months ago
- 6 comments
#331 - The creation of `getGroups.PKNCAdata` for use within PKNCA
Pull Request -
State: closed - Opened by DBartlettHP 3 months ago
- 3 comments
#330 - Create `getGroups.PKNCAdata()`
Issue -
State: closed - Opened by billdenney 3 months ago
#329 - Create `set_intervals()` and `assert_intervals()` functions
Issue -
State: closed - Opened by billdenney 3 months ago
- 2 comments
#328 - Create assertions for each PKNCA object type
Issue -
State: open - Opened by billdenney 3 months ago
#326 - Documentation changes
Pull Request -
State: closed - Opened by DBartlettHP 3 months ago
- 2 comments
#320 - If a summary value is not calculated, give the not calculated abbreviation in the summary caption
Issue -
State: open - Opened by billdenney 4 months ago
#318 - auclast and aucinf not calculated
Issue -
State: closed - Opened by jeslo328 4 months ago
- 2 comments
#317 - Enhancement request: Allow exclusion based on adjusted r^2
Issue -
State: open - Opened by Andy00000000000 4 months ago
- 3 comments
#316 - Half life with NC values in output
Issue -
State: closed - Opened by danieleboaretti 5 months ago
- 3 comments
#315 - Implement statistics handling from NCA results
Issue -
State: open - Opened by billdenney 5 months ago
#313 - Clarify documentation on pk.calc.auxc()
Pull Request -
State: closed - Opened by billdenney 6 months ago
#312 - Lint updates
Pull Request -
State: closed - Opened by billdenney 6 months ago
#311 - argument "fun_linear" is missing, with no default
Issue -
State: closed - Opened by joybaker1 6 months ago
- 1 comment
#310 - Exclude should occur before missing time check
Issue -
State: open - Opened by billdenney 6 months ago
#308 - `superposition()` does not filter concentration data for missing values
Issue -
State: open - Opened by billdenney 7 months ago
#307 - Resolve some codefactor issues
Pull Request -
State: closed - Opened by billdenney 7 months ago
#306 - Switch generate.data.R to be a helper file, using the testthat infrastructure to include the functions
Pull Request -
State: closed - Opened by billdenney 7 months ago
#305 - Remove native pipes (`|>`) to reduce the R version requirement
Pull Request -
State: closed - Opened by billdenney 7 months ago
#304 - Native pipe and R version dependency
Issue -
State: closed - Opened by kylebaron 7 months ago
- 3 comments
#302 - How do I run PKNCA validation?
Issue -
State: closed - Opened by Just-another-Beth 7 months ago
#301 - Simplify exclude column addition
Pull Request -
State: closed - Opened by billdenney 7 months ago
#300 - Ensure that testing for uniqueness only occurs after exclusions
Pull Request -
State: closed - Opened by billdenney 7 months ago
#299 - Simplify the `setExcludeColumn()` function
Issue -
State: closed - Opened by billdenney 7 months ago
#298 - Apply uniqueness check after excluding values
Issue -
State: closed - Opened by billdenney 7 months ago
#297 - Automatic parameter selection
Pull Request -
State: closed - Opened by billdenney 8 months ago
#295 - NCA with Bootstrap for sparse sampling data
Issue -
State: open - Opened by j9cc 8 months ago
- 3 comments
#293 - sparse_auc_df and sparse_auc_se are in the parameter list (fix #292)
Pull Request -
State: closed - Opened by billdenney 9 months ago
#292 - sparse_se and sparse_df missing from get.interval.cols()
Issue -
State: closed - Opened by john-harrold 9 months ago
- 1 comment
#290 - I'm making no progress
Issue -
State: closed - Opened by john-harrold 9 months ago
- 2 comments
#289 - NCA output in CDISC nomenclature
Issue -
State: open - Opened by roninsightrx 9 months ago
- 1 comment
#288 - NCA analysis using PKNCA - Back extrapolation not possible
Issue -
State: closed - Opened by caribap 10 months ago
#286 - Unable to obtain AUC
Issue -
State: closed - Opened by jeslo328 10 months ago
- 1 comment
#285 - Add filter_excluded argument to PKNCAresults as.data.frame() method
Pull Request -
State: closed - Opened by billdenney 10 months ago
#284 - Initial placeholder for Tobit regression method description
Pull Request -
State: closed - Opened by billdenney 11 months ago
#282 - Allow parameters to be excluded from summary with the new `summary.PKNCAresults(drop_param)` argument
Pull Request -
State: closed - Opened by billdenney 11 months ago
#281 - PKNCA output documentation
Issue -
State: closed - Opened by andersone1 11 months ago
- 2 comments
#280 - Add `totdose` parameter
Pull Request -
State: closed - Opened by billdenney 12 months ago
#279 - As various
Pull Request -
State: closed - Opened by billdenney 12 months ago
#278 - Feature request: Add `as_PKNCAconc()`, `as_PKNCAdose()`, and `as_PKNCAdata()` generics and methods
Issue -
State: closed - Opened by billdenney 12 months ago
#277 - Support pknca_units_table() with preferred units and some default units missing
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#276 - Add pknca_units_table() `concu_pref`, `doseu_pref`, `amountu_pref`, and `timeu_pref` arguments
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#275 - Remove dead code; stop test warnings
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#274 - Files supportive of sparse AUC standard error calculation
Pull Request -
State: open - Opened by billdenney about 1 year ago
#273 - Add as.data.frame.PKNCAresults(filter_requested = TRUE) argument
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#272 - Add `nest()` verbs
Issue -
State: open - Opened by billdenney about 1 year ago
#271 - Prepare for release of version 0.11.0
Pull Request -
State: closed - Opened by billdenney about 1 year ago
- 1 comment
#270 - Use more subtle exclusion for aucint.inf.obs and aucint.inf.pred
Issue -
State: open - Opened by billdenney about 1 year ago
#269 - Feature request: Check for possibly missing Cmax/Tmax and Tlast
Issue -
State: open - Opened by billdenney about 1 year ago
#268 - Add keep_interval_cols option
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#267 - Add more cav calculations based on AUCint (fix #45)
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#266 - Add a progress bar
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#265 - Improve `PKNCA_impute_method_start_predose()` so that it can look outside the group
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#264 - Fix imputation
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#263 - 203 feature request pkcalcauctau
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#262 - Count N and n more effectively and improve summaries
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#261 - Move summarization into its own file
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#260 - Simplify summary calculations (first pass)
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#259 - Initial code for function to help create interval definitions for users
Pull Request -
State: closed - Opened by billdenney about 1 year ago
#257 - Feature request: Interpolating C0 for AUC calculations
Issue -
State: closed - Opened by john-harrold about 1 year ago
- 4 comments
#256 - Update vignette when secondary parameters are calculable
Issue -
State: open - Opened by billdenney over 1 year ago
#255 - Update training slides with new features; add Project Dontabhaktuni materials
Pull Request -
State: closed - Opened by billdenney over 1 year ago
#254 - aucint.inf.obs now returns zero with all zero concentrations via `pk.nca()` (fix #253)
Pull Request -
State: closed - Opened by billdenney over 1 year ago
#253 - AUCint calculation fails with all concentrations as zero
Issue -
State: closed - Opened by billdenney over 1 year ago
- 1 comment
#252 - Remove warnings
Pull Request -
State: closed - Opened by billdenney over 1 year ago
#251 - AUC integration vignette background coloring and method are not correct for AUCall
Issue -
State: closed - Opened by billdenney over 1 year ago
#250 - AUCall extrapolation increases
Pull Request -
State: closed - Opened by billdenney over 1 year ago
#249 - Concentration extrapolation with AUCall goes up when it should go down
Issue -
State: closed - Opened by billdenney over 1 year ago