Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / bihealth/mehari issues and pull requests
#316 - build(deps): bump shlex from 1.2.0 to 1.3.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#315 - build(deps): bump the noodles group with 7 updates
Pull Request -
State: open - Opened by dependabot[bot] 10 months ago
Labels: dependencies
#314 - build(deps): bump async-compression from 0.4.5 to 0.4.6
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#313 - build(deps): bump clap-verbosity-flag from 2.1.1 to 2.1.2
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#312 - build(deps): bump uuid from 1.6.1 to 1.7.0
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#311 - build(deps): bump h2 from 0.3.22 to 0.3.24
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#310 - build(deps): bump clap from 4.4.12 to 4.4.17
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#309 - build(deps): bump the noodles group with 7 updates
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#308 - build(deps): bump serde_json from 1.0.108 to 1.0.111
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#307 - build(deps): bump serde_yaml from 0.9.29 to 0.9.30
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#306 - build(deps): bump byte-unit from 4.0.19 to 5.1.3
Pull Request -
State: open - Opened by dependabot[bot] 10 months ago
Labels: dependencies
#305 - build(deps): bump anyhow from 1.0.75 to 1.0.79
Pull Request -
State: closed - Opened by dependabot[bot] 10 months ago
- 1 comment
Labels: dependencies
#304 - build(deps): bump tempfile from 3.8.1 to 3.9.0
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#303 - build(deps): bump serde_yaml from 0.9.27 to 0.9.29
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#302 - build(deps): bump clap from 4.4.11 to 4.4.12
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#301 - Ensure ManePlusClinical is properly recognized/annotated
Issue -
State: open - Opened by holtgrewe 11 months ago
Labels: bug
#300 - build(deps): bump the noodles group with 7 updates
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#299 - build(deps): bump futures from 0.3.29 to 0.3.30
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#298 - build(deps): bump actix-web from 4.4.0 to 4.4.1
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#297 - build(deps): bump tokio from 1.35.0 to 1.35.1
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#296 - build(deps): bump unsafe-libyaml from 0.2.9 to 0.2.10
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#295 - build(deps): bump clap-verbosity-flag from 2.1.0 to 2.1.1
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#294 - build(deps): bump byte-unit from 4.0.19 to 5.1.2
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#293 - build(deps): bump the noodles group with 7 updates
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#292 - build(deps): bump zerocopy from 0.7.28 to 0.7.31
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#291 - build(deps): bump bio from 1.4.0 to 1.5.0
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#290 - build(deps): bump tokio from 1.34.0 to 1.35.0
Pull Request -
State: closed - Opened by dependabot[bot] 11 months ago
- 1 comment
Labels: dependencies
#289 - build(deps): bump clap from 4.4.10 to 4.4.11
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#288 - chore(main): release 0.21.1
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 1 comment
Labels: autorelease: tagged
#287 - fix: bumping annonars dependency to fix protobuf issues
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
#286 - build(deps): bump serde from 1.0.192 to 1.0.193
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#285 - build(deps): bump clap from 4.4.8 to 4.4.9
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#284 - build(deps): bump prost from 0.12.2 to 0.12.3
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#283 - build(deps): bump byte-unit from 4.0.19 to 5.0.3
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#282 - build(deps): bump the noodles group with 1 update
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#281 - fix: adjusting dependency to get rid of outdated ones
Pull Request -
State: open - Opened by holtgrewe 12 months ago
#280 - chore(main): release 0.21.0
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 1 comment
Labels: autorelease: tagged
#279 - fix!: adjusting enum values
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
#278 - chore(main): release 0.20.0
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 1 comment
Labels: autorelease: tagged
#277 - refactor!: moving crate::pbs::mehari => crate::pbs
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
- 1 comment
#276 - chore(main): release 0.19.1
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 1 comment
Labels: autorelease: tagged
#275 - fix: copy in protobufs into docker builds
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
#274 - chore(main): release 0.19.0
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 1 comment
Labels: autorelease: tagged
#273 - feat!: serializing protobufs pbjson-build (#272)
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
- 1 comment
#272 - Properly serialize protobuf enums
Issue -
State: closed - Opened by holtgrewe 12 months ago
Labels: enhancement
#271 - build(deps): bump the noodles group with 4 updates
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 2 comments
Labels: dependencies
#270 - build(deps): bump uuid from 1.5.0 to 1.6.1
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#269 - chore(main): release 0.18.1
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 2 comments
Labels: autorelease: tagged
#268 - chore: update dependencies
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
#267 - build(deps): bump the noodles group with 4 updates
Pull Request -
State: closed - Opened by dependabot[bot] 12 months ago
- 1 comment
Labels: dependencies
#266 - chore(main): release 0.18.0
Pull Request -
State: closed - Opened by varfish-bot 12 months ago
- 1 comment
Labels: autorelease: tagged
#265 - feat: properly handle selenoprotein import from cdot (#224)
Pull Request -
State: closed - Opened by holtgrewe 12 months ago
- 1 comment
#264 - Define transcript preference
Issue -
State: open - Opened by holtgrewe about 1 year ago
Labels: enhancement
#263 - chore(main): release 0.17.1
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#262 - fix: fixing implementation of Provider::get_tx_for_gene
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#261 - build(deps): bump env_logger from 0.10.0 to 0.10.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#260 - build(deps): bump clap from 4.4.7 to 4.4.8
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#259 - build(deps): bump tracing-subscriber from 0.3.17 to 0.3.18
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#258 - build(deps): bump the noodles group with 3 updates
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#257 - feat: adding support for ClinCNV (#253)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#256 - chore(main): release 0.17.0
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#255 - fix!: make --path-input-ped for seqvars annotation required (#194)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
#254 - feat: adding helper script to fix FreeBayes VCF (#252)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#253 - Add support for ClinCNV
Issue -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
Labels: enhancement
#252 - Ensure small variant annotation works with FreeBayes VCF files
Issue -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
Labels: enhancement
#251 - Implement interpretation of physical phasing information
Issue -
State: open - Opened by holtgrewe about 1 year ago
Labels: enhancement
#250 - chore(main): release 0.16.0
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#249 - feat: allow user to select transcript source on CLI (#247)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#248 - feat: update tx support to latest cdot with MANE label transfer (#245)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
#247 - Allow user to select only to report RefSeq/ENSEMBL transcripts
Issue -
State: closed - Opened by holtgrewe about 1 year ago
Labels: enhancement
#246 - Implement NMD and NMD escape annotations
Issue -
State: open - Opened by holtgrewe about 1 year ago
Labels: enhancement
#245 - Update transcripts to latest cdot with MANE annotations
Issue -
State: closed - Opened by holtgrewe about 1 year ago
Labels: enhancement
#244 - build(deps): bump indexmap from 2.0.2 to 2.1.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#243 - build(deps): bump the noodles group with 3 updates
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 2 comments
Labels: dependencies
#242 - build(deps): bump serde from 1.0.189 to 1.0.191
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#241 - build(deps): bump clap from 4.4.6 to 4.4.7
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#240 - build(deps): bump procfs from 0.15.1 to 0.16.0
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#239 - build(deps): bump futures from 0.3.28 to 0.3.29
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#238 - build(deps): bump serde_json from 1.0.107 to 1.0.108
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#237 - build(deps): bump tempfile from 3.8.0 to 3.8.1
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#236 - build(deps): bump the noodles group with 3 updates
Pull Request -
State: closed - Opened by dependabot[bot] about 1 year ago
- 1 comment
Labels: dependencies
#235 - chore(main): release 0.15.2
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#234 - fix: remove second async runtime creation
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
#233 - chore(main): release 0.15.1
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#232 - fix: properly flush and sync all writers
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#231 - chore(main): release 0.15.0
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 1 comment
Labels: autorelease: tagged
#230 - feat: adding async I/O, espec. for SV caller guessing
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 2 comments
#229 - chore(main): release 0.14.3
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#228 - fix: index out of bounds error in stop_retained variant (#226)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#227 - fix: switching from unmaintained tempdir to tempfile
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#226 - byte index out of bounds for GRCh37:10:5139789:A:AGTG
Issue -
State: closed - Opened by holtgrewe about 1 year ago
Labels: bug
#225 - chore(main): release 0.14.2
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#224 - Properly handle selenoproteins
Issue -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
Labels: enhancement
#223 - fix: make distance to next exon correct (#222)
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#222 - Distance to exon incorrect for on-exon variants
Issue -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
Labels: bug
#221 - chore: templates for PRs and issues
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
#220 - fix: dependency bumps, including annonars
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment
#219 - chore(main): release 0.14.1
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 2 comments
Labels: autorelease: tagged
#218 - chore(main): release 0.14.0
Pull Request -
State: closed - Opened by varfish-bot about 1 year ago
- 1 comment
Labels: autorelease: tagged
#217 - feat: bump annonars, write out VCV+RCV+clinsig
Pull Request -
State: closed - Opened by holtgrewe about 1 year ago
- 1 comment