bihealth/biomedsheets issues and pull requests

#39 - Bump black from 22.8.0 to 24.3.0 in /requirements

Pull Request - State: open - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies

#38 - chore: release 0.12.0

Pull Request - State: open - Opened by github-actions[bot] about 1 year ago
Labels: autorelease: pending

#37 - feat: Added more verbose error message to the _resolve function, see issue #36

Pull Request - State: closed - Opened by ErikaZ95 about 1 year ago - 3 comments

#36 - Verbose error message for RefResolver

Issue - State: closed - Opened by ErikaZ95 about 1 year ago

#35 - ci: Remove versioneer; use release-please for versioning

Pull Request - State: closed - Opened by sellth about 1 year ago - 1 comment

#34 - Remove versioneer

Issue - State: closed - Opened by sellth about 1 year ago

#33 - chore: release 0.11.7

Pull Request - State: closed - Opened by github-actions[bot] almost 2 years ago - 1 comment
Labels: autorelease: tagged

#32 - fix: MANIFEST.in file for CHANGELOG.md

Pull Request - State: closed - Opened by holtgrewe almost 2 years ago - 1 comment

#31 - chore: release 0.11.6

Pull Request - State: closed - Opened by github-actions[bot] almost 2 years ago - 1 comment
Labels: autorelease: tagged

#30 - fix: implementing release-please

Pull Request - State: closed - Opened by holtgrewe almost 2 years ago - 1 comment

#29 - Fix index definition for pedigree of unaffected (#28)

Pull Request - State: open - Opened by eudesbarbosa over 2 years ago

#28 - Arbitrarily set index if no pedigree member affected

Issue - State: open - Opened by eudesbarbosa over 2 years ago

#27 - Hotfix: fixed consistency check for Duo Cases

Pull Request - State: closed - Opened by eudesbarbosa over 2 years ago - 1 comment

#26 - InconsistentPedigreeException raised if father is missing

Issue - State: closed - Opened by holtgrewe over 2 years ago

#25 - Add consistency test of pedigree definition for Germline sheet

Pull Request - State: closed - Opened by eudesbarbosa over 2 years ago - 2 comments

#24 - Cryptic error message if sample sheet inconsistent

Issue - State: closed - Opened by eudesbarbosa over 2 years ago

#23 - Remove hyphen constrain for identifiers for Germline sheet

Pull Request - State: closed - Opened by eudesbarbosa over 2 years ago - 1 comment

#22 - Fixing issues with ResourceAdapter (#21).

Pull Request - State: closed - Opened by holtgrewe over 2 years ago

#21 - Issues with ResourceAdapter

Issue - State: closed - Opened by holtgrewe over 2 years ago

#20 - Fixing warnings in tests (#19).

Pull Request - State: closed - Opened by holtgrewe over 2 years ago

#19 - Fix deprecation warnings

Issue - State: closed - Opened by holtgrewe over 2 years ago

#18 - Bump `jsonschema` version

Issue - State: closed - Opened by eudesbarbosa over 2 years ago - 1 comment

#17 - Bumped depedendies and Python versions.

Pull Request - State: closed - Opened by eudesbarbosa almost 3 years ago

#16 - Conflict with latest `varfish-cli` release

Issue - State: closed - Opened by eudesbarbosa almost 3 years ago - 2 comments

#15 - Hyphen not allowed in patientName column - Germline

Issue - State: closed - Opened by eudesbarbosa almost 3 years ago - 1 comment

#14 - Adding property that lists available kwargs.

Pull Request - State: closed - Opened by holtgrewe almost 4 years ago

#13 - Define CI workflow

Pull Request - State: closed - Opened by eudesbarbosa almost 4 years ago

#12 - Join samples with same family identifier

Pull Request - State: closed - Opened by eudesbarbosa almost 4 years ago - 1 comment

#11 - fix typo: foat -> float

Pull Request - State: closed - Opened by messersc over 7 years ago

#10 - Discrepancy in possible values for libraryType

Issue - State: open - Opened by messersc over 7 years ago - 1 comment

#9 - Generic TSV sample sheets

Pull Request - State: closed - Opened by holtgrewe almost 8 years ago

#8 - Updating documentation

Pull Request - State: closed - Opened by holtgrewe almost 8 years ago

#7 - BioSample missing in germline schema?

Issue - State: closed - Opened by oliverdrechsel almost 8 years ago - 2 comments

#6 - Oliver comments

Pull Request - State: closed - Opened by oliverdrechsel almost 8 years ago

#5 - Add support for generic experiment TSV files

Issue - State: closed - Opened by holtgrewe almost 8 years ago - 1 comment
Labels: enhancement

#4 - Custom field support for cancer/germline TSV

Pull Request - State: closed - Opened by holtgrewe almost 8 years ago - 2 comments
Labels: enhancement

#3 - https issue

Issue - State: closed - Opened by oliverdrechsel almost 8 years ago

#2 - setup doesn't work as described

Issue - State: open - Opened by oliverdrechsel almost 8 years ago - 3 comments

#1 - Write out pedigrees

Pull Request - State: closed - Opened by holtgrewe almost 8 years ago - 1 comment

GitHub / bihealth/biomedsheets issues and pull requests