Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bigdatagenomics/adam issues and pull requests

#2356 - Allow space in IntervalList species header value

Pull Request - State: closed - Opened by heuermh almost 3 years ago

#2356 - Allow space in IntervalList species header value

Pull Request - State: closed - Opened by heuermh almost 3 years ago

#2355 - Parse error in interval list header

Issue - State: closed - Opened by heuermh almost 3 years ago

#2355 - Parse error in interval list header

Issue - State: closed - Opened by heuermh almost 3 years ago

#2355 - Parse error in interval list header

Issue - State: closed - Opened by heuermh almost 3 years ago

#2354 - Update spark dependency version to 3.2.1

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2354 - Update spark dependency version to 3.2.1

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2353 - Update Spark dependency version to 3.2.1

Issue - State: closed - Opened by heuermh about 3 years ago

#2353 - Update Spark dependency version to 3.2.1

Issue - State: closed - Opened by heuermh about 3 years ago

#2353 - Update Spark dependency version to 3.2.1

Issue - State: closed - Opened by heuermh about 3 years ago

#2353 - Update Spark dependency version to 3.2.1

Issue - State: closed - Opened by heuermh about 3 years ago

#2352 - Add conda, homebrew, biocontainers installation docs

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2352 - Add conda, homebrew, biocontainers installation docs

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2350 - error when saveAsPairedFastq files

Issue - State: closed - Opened by ghost about 3 years ago - 2 comments

#2350 - error when saveAsPairedFastq files

Issue - State: closed - Opened by ghost about 3 years ago - 2 comments

#2349 - StackOverflowError in avro SpecificDatumWriter

Issue - State: open - Opened by heuermh about 3 years ago - 1 comment

#2349 - StackOverflowError in avro SpecificDatumWriter

Issue - State: open - Opened by heuermh about 3 years ago - 1 comment

#2348 - Note Bioconda and Homebrew in readme and installation docs

Issue - State: closed - Opened by heuermh about 3 years ago

#2348 - Note Bioconda and Homebrew in readme and installation docs

Issue - State: closed - Opened by heuermh about 3 years ago

#2347 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2347 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2347 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2347 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Pull Request - State: closed - Opened by heuermh about 3 years ago

#2346 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Issue - State: closed - Opened by heuermh about 3 years ago

#2346 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Issue - State: closed - Opened by heuermh about 3 years ago

#2346 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Issue - State: closed - Opened by heuermh about 3 years ago

#2346 - Migrate Github Actions JDK from 'adopt' to 'temurin'

Issue - State: closed - Opened by heuermh about 3 years ago

#2345 - [ADAM-2341] Update bdg-formats dependency version to 0.17.0

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2345 - [ADAM-2341] Update bdg-formats dependency version to 0.17.0

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2345 - [ADAM-2341] Update bdg-formats dependency version to 0.17.0

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2345 - [ADAM-2341] Update bdg-formats dependency version to 0.17.0

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2343 - Update pom.xml url to Github repository

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2343 - Update pom.xml url to Github repository

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2343 - Update pom.xml url to Github repository

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2342 - Update pom.xml url to Github repository

Issue - State: closed - Opened by heuermh over 3 years ago

#2342 - Update pom.xml url to Github repository

Issue - State: closed - Opened by heuermh over 3 years ago

#2342 - Update pom.xml url to Github repository

Issue - State: closed - Opened by heuermh over 3 years ago

#2342 - Update pom.xml url to Github repository

Issue - State: closed - Opened by heuermh over 3 years ago

#2341 - Update bdg-formats to 0.17.0 release

Issue - State: closed - Opened by heuermh over 3 years ago

#2341 - Update bdg-formats to 0.17.0 release

Issue - State: closed - Opened by heuermh over 3 years ago

#2340 - Update Scala dependency version to 2.12.15

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2340 - Update Scala dependency version to 2.12.15

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2339 - Note Spark version 3.2.0 or later is now required

Issue - State: closed - Opened by heuermh over 3 years ago

#2339 - Note Spark version 3.2.0 or later is now required

Issue - State: closed - Opened by heuermh over 3 years ago

#2339 - Note Spark version 3.2.0 or later is now required

Issue - State: closed - Opened by heuermh over 3 years ago

#2339 - Note Spark version 3.2.0 or later is now required

Issue - State: closed - Opened by heuermh over 3 years ago

#2338 - [ADAM-2333] Add proteinId field to Feature

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2338 - [ADAM-2333] Add proteinId field to Feature

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2338 - [ADAM-2333] Add proteinId field to Feature

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2337 - Update github-changes-maven-plugin version to 1.2

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2337 - Update github-changes-maven-plugin version to 1.2

Pull Request - State: closed - Opened by heuermh over 3 years ago

#2335 - Add Scala 2.13 to build

Issue - State: open - Opened by heuermh over 3 years ago

#2335 - Add Scala 2.13 to build

Issue - State: open - Opened by heuermh over 3 years ago

#2334 - Extract multi region in one shot

Issue - State: closed - Opened by ghost over 3 years ago - 2 comments

#2334 - Extract multi region in one shot

Issue - State: closed - Opened by ghost over 3 years ago - 2 comments

#2333 - Add proteinId field to Feature

Issue - State: closed - Opened by heuermh over 3 years ago

#2333 - Add proteinId field to Feature

Issue - State: closed - Opened by heuermh over 3 years ago

#2333 - Add proteinId field to Feature

Issue - State: closed - Opened by heuermh over 3 years ago

#2331 - Update Spark dependency version to 3.2.0

Issue - State: closed - Opened by heuermh over 3 years ago

#2331 - Update Spark dependency version to 3.2.0

Issue - State: closed - Opened by heuermh over 3 years ago

#2329 - Add CITATION.cff for citation(s)

Issue - State: closed - Opened by heuermh over 3 years ago - 1 comment

#2329 - Add CITATION.cff for citation(s)

Issue - State: closed - Opened by heuermh over 3 years ago - 1 comment

#2325 - trim sam format readname

Pull Request - State: closed - Opened by hxdhan over 3 years ago - 2 comments

#2325 - trim sam format readname

Pull Request - State: closed - Opened by hxdhan over 3 years ago - 2 comments

#2325 - trim sam format readname

Pull Request - State: closed - Opened by hxdhan over 3 years ago - 2 comments

#2325 - trim sam format readname

Pull Request - State: closed - Opened by hxdhan over 3 years ago - 2 comments

#2322 - Missing SAM header when using pipe API

Issue - State: closed - Opened by heuermh over 3 years ago - 9 comments

#2322 - Missing SAM header when using pipe API

Issue - State: closed - Opened by heuermh over 3 years ago - 9 comments

#2322 - Missing SAM header when using pipe API

Issue - State: closed - Opened by heuermh over 3 years ago - 9 comments

#2322 - Missing SAM header when using pipe API

Issue - State: closed - Opened by heuermh over 3 years ago - 9 comments

#2321 - saveAsSam format

Issue - State: closed - Opened by hxdhan over 3 years ago - 9 comments

#2321 - saveAsSam format

Issue - State: closed - Opened by hxdhan over 3 years ago - 9 comments

#2321 - saveAsSam format

Issue - State: closed - Opened by hxdhan over 3 years ago - 9 comments

#2321 - saveAsSam format

Issue - State: closed - Opened by hxdhan over 3 years ago - 9 comments

#2313 - Remove Github Pages environment and branch

Issue - State: closed - Opened by heuermh over 3 years ago - 1 comment

#2313 - Remove Github Pages environment and branch

Issue - State: closed - Opened by heuermh over 3 years ago - 1 comment

#2303 - Benchmark spark.kryo.unsafe config performance

Issue - State: closed - Opened by heuermh almost 4 years ago - 1 comment

#2303 - Benchmark spark.kryo.unsafe config performance

Issue - State: closed - Opened by heuermh almost 4 years ago - 1 comment

#2295 - loadBam cannot load BAM files hosted on SRA s3 archive

Issue - State: closed - Opened by heuermh about 4 years ago - 1 comment

#2295 - loadBam cannot load BAM files hosted on SRA s3 archive

Issue - State: closed - Opened by heuermh about 4 years ago - 1 comment

#2289 - Update Spark to 3.2.0, Parquet to 1.12.1, Avro to 1.10.2

Pull Request - State: closed - Opened by heuermh about 4 years ago - 2 comments

#2289 - Update Spark to 3.2.0, Parquet to 1.12.1, Avro to 1.10.2

Pull Request - State: closed - Opened by heuermh about 4 years ago - 2 comments

#2279 - Improve Ensembl VEP mapping to TranscriptEffect

Issue - State: open - Opened by heuermh over 4 years ago - 1 comment

#2225 - I'm failing to use this package

Issue - State: open - Opened by Hoeze over 5 years ago - 11 comments

#2225 - I'm failing to use this package

Issue - State: open - Opened by Hoeze over 5 years ago - 11 comments

#2209 - [ADAM-2208] Bump bdg-formats dependency version to 0.14.0

Pull Request - State: closed - Opened by heuermh over 5 years ago - 1 comment

#2209 - [ADAM-2208] Bump bdg-formats dependency version to 0.14.0

Pull Request - State: closed - Opened by heuermh over 5 years ago - 1 comment

#2209 - [ADAM-2208] Bump bdg-formats dependency version to 0.14.0

Pull Request - State: closed - Opened by heuermh over 5 years ago - 1 comment

#2199 - Refactor Dataset save methods for consistency

Issue - State: open - Opened by heuermh over 5 years ago - 2 comments

#2199 - Refactor Dataset save methods for consistency

Issue - State: open - Opened by heuermh over 5 years ago - 2 comments