biasmv/pv issues and pull requests

#195 - Using Python CGI to create PV instances on the fly

Issue - State: open - Opened by WCawdell over 1 year ago - 2 comments

#194 - Inquiry support drawing a path from one residue to another residue

Issue - State: open - Opened by juexinwang over 2 years ago - 9 comments

#193 - How to select all residues within radius of mouse click?

Issue - State: closed - Opened by wjs20 over 2 years ago - 6 comments

#192 - Display problem of structure of alphafold2

Issue - State: open - Opened by lh12565 over 2 years ago - 6 comments

#191 - I AM NEW

Issue - State: open - Opened by ecmagz about 3 years ago

#190 - Disabling page jump to viewer by default

Pull Request - State: open - Opened by gurucharan2206 over 3 years ago

#189 - Suggestion: Make bio-pv a web component

Issue - State: open - Opened by Nikhil-Vats over 5 years ago - 2 comments

#188 - fix shader error no longer ignored by chrome 75

Pull Request - State: open - Opened by philetus over 5 years ago

#187 - Test updating pv

Pull Request - State: closed - Opened by hmc-cs-bbaker over 5 years ago

#186 - Coloring each residue by a hex code color

Issue - State: open - Opened by ODIN987 over 5 years ago - 1 comment

#185 - project still alive?

Issue - State: open - Opened by pieterlukasse almost 6 years ago - 3 comments

#184 - Structure creation by hand

Issue - State: open - Opened by theasjblog about 6 years ago - 1 comment

#183 - CIAO MARCO!!! PROBLEMI CON APERTURA PDB FILES

Issue - State: open - Opened by gaiagbola about 6 years ago

#182 - Partial coloring of structure

Issue - State: open - Opened by lokapal over 7 years ago - 3 comments

#181 - package.json main points to non-existent file

Issue - State: open - Opened by gomoto over 7 years ago

#180 - atom has no _residue

Issue - State: open - Opened by mizuchi3 over 7 years ago

#179 - If a trace has a length of 1, it may not render properly

Issue - State: open - Opened by jo-sm over 7 years ago

#178 - HETATM and Organic sticks

Issue - State: open - Opened by abaybek almost 8 years ago - 1 comment

#177 - Support MMTF format

Issue - State: open - Opened by tomnewport almost 8 years ago

#176 - Disabling zoom on scroll

Issue - State: open - Opened by RasmusFonseca almost 8 years ago

#175 - Uncaught TypeError: Cannot read property 'centralAtom' of undefined

Issue - State: open - Opened by arthurchipdean almost 8 years ago

#174 - Dead contribution guidelines link in readme.md

Issue - State: closed - Opened by omarwagih almost 8 years ago - 1 comment

#173 - Any way to visually make certain bonds stronger?

Issue - State: open - Opened by ItsRaminTime about 8 years ago - 2 comments

#172 - Atom selection slightly off when in ball and stick representation mode

Issue - State: open - Opened by ItsRaminTime about 8 years ago - 2 comments

#171 - Unexpected spheres rendering using setShowRelated( )

Issue - State: open - Opened by giagitom about 8 years ago - 2 comments

#170 - Increasing label font size issue

Issue - State: closed - Opened by giagitom about 8 years ago - 2 comments

#169 - About secondary structure view in cartoon

Issue - State: open - Opened by realbigws about 8 years ago - 1 comment

#168 - Fixed label in front of camera

Issue - State: closed - Opened by giagitom about 8 years ago - 10 comments

#167 - Sticks representation under cursor

Issue - State: closed - Opened by jergosh over 8 years ago - 1 comment

#166 - setSelectionColor

Issue - State: closed - Opened by gomoto over 8 years ago - 5 comments

#165 - Update viewer to support zipped pdb files

Pull Request - State: closed - Opened by rpartridge over 8 years ago - 5 comments

#164 - Get Camera/ Current Rotation Matrix From Viewer

Issue - State: closed - Opened by arthurchipdean over 8 years ago - 2 comments

#163 - Viewer height

Issue - State: closed - Opened by polaton over 8 years ago - 2 comments

#162 - Add grad param for Color.byElement & Color.bySS

Pull Request - State: closed - Opened by ajfarkas over 8 years ago - 2 comments

#161 - Transform model position

Issue - State: closed - Opened by ajfarkas over 8 years ago - 4 comments

#160 - Adding and removing customMesh

Issue - State: closed - Opened by RasmusFonseca over 8 years ago - 1 comment

#159 - secondary structure not rendering when no HELIX/SHEET in pdb file

Issue - State: open - Opened by omarwagih almost 9 years ago - 5 comments

#158 - Colour structure by custom residue id mapping (e.g. temperature factors)

Issue - State: closed - Opened by tomnewport almost 9 years ago - 10 comments

#157 - override manualAntialiasing

Pull Request - State: closed - Opened by ajfarkas almost 9 years ago - 2 comments

#156 - surface

Issue - State: open - Opened by andreassteffen almost 9 years ago - 3 comments

#155 - Getting an orthoscopic view.

Issue - State: open - Opened by esguerra almost 9 years ago - 1 comment

#154 - Viewer.fitTo multiple MolView objects

Issue - State: closed - Opened by gomoto almost 9 years ago - 3 comments

#153 - custom highlight alpha

Pull Request - State: closed - Opened by ajfarkas almost 9 years ago - 3 comments

#152 - REMARK 465

Issue - State: closed - Opened by simonbrent almost 9 years ago - 6 comments

#151 - Selection of Polymers Chains

Issue - State: closed - Opened by jawahar1 almost 9 years ago - 1 comment

#150 - unable to set selectionColor alpha

Issue - State: closed - Opened by ajfarkas almost 9 years ago - 5 comments

#149 - touch event calls click function

Pull Request - State: closed - Opened by ajfarkas almost 9 years ago - 4 comments

#148 - Touch compatibility

Issue - State: open - Opened by ajfarkas almost 9 years ago

#147 - add high precision shaders for Android

Pull Request - State: closed - Opened by ajfarkas almost 9 years ago - 1 comment

#146 - WebGL Error on mobile, v1.9.0dev

Issue - State: closed - Opened by ajfarkas almost 9 years ago - 5 comments

#145 - Update README.md

Pull Request - State: closed - Opened by smsaladi almost 9 years ago - 1 comment

#144 - Cartoon edges messed up the rendering in segments.

Issue - State: closed - Opened by javierbq almost 9 years ago - 5 comments

#143 - add full Viewer.ballsAndStick model

Pull Request - State: closed - Opened by ajfarkas almost 9 years ago - 5 comments

#142 - Add True Ball-and-Stick model

Issue - State: closed - Opened by ajfarkas almost 9 years ago - 1 comment

#141 - Exposing atom serial number for custom coloring operation

Issue - State: closed - Opened by andrewguy almost 9 years ago - 6 comments

#140 - Drawing pocket surfaces given a list of pocket residues

Issue - State: open - Opened by JimSEOW about 9 years ago - 1 comment

#139 - Cartoon Rendering as Tubes

Issue - State: closed - Opened by arthurchipdean about 9 years ago - 3 comments

#138 - Remove sphere from mesh

Issue - State: closed - Opened by ftabaro about 9 years ago - 6 comments

#137 - Fix a minor spelling error on index.html

Pull Request - State: closed - Opened by hexagon6 about 9 years ago - 1 comment

#136 - pv.Viewer.quality() returning undefined

Issue - State: closed - Opened by gomoto about 9 years ago

#135 - Pleatedness of beta strands in cartoon mode

Issue - State: closed - Opened by gomoto about 9 years ago - 2 comments

#134 - Partial bonds in ballsAndSticks mode

Issue - State: open - Opened by gomoto about 9 years ago - 1 comment

#133 - Removing apostrophe from wan't

Pull Request - State: closed - Opened by tomck about 9 years ago - 1 comment

#132 - Draw cubes, spheres within pv

Issue - State: open - Opened by drewbryant about 9 years ago - 4 comments

#131 - Adding a custom property

Issue - State: closed - Opened by jergosh about 9 years ago - 2 comments

#130 - Problem with usage of pv.mol.superpose function

Issue - State: closed - Opened by nadziejowo about 9 years ago - 3 comments

#129 - Typo in residue.js

Issue - State: closed - Opened by paulsmirnov about 9 years ago - 2 comments

#128 - Adding optional time parameter for autoZoom and fitTo.

Pull Request - State: closed - Opened by arthurchipdean about 9 years ago

#127 - Citation points to v1.3

Issue - State: closed - Opened by stared over 9 years ago - 1 comment

#126 - file pvviewer.py (for module pvviewer) not found

Issue - State: open - Opened by hainm over 9 years ago - 6 comments

#125 - RFC: Jupyter/IPython Notebook Features

Issue - State: open - Opened by biasmv over 9 years ago - 11 comments

#124 - py3 compat

Pull Request - State: closed - Opened by hainm over 9 years ago - 1 comment

#123 - loadAllModels Uncaught TypeError: structure.assembly is not a function

Issue - State: closed - Opened by arthurchipdean over 9 years ago - 3 comments

#122 - Color by amino acid code

Issue - State: closed - Opened by gomoto over 9 years ago - 5 comments

#121 - mouse event sync between viewers

Issue - State: closed - Opened by px172 over 9 years ago - 7 comments

#120 - Rainbow color direction

Issue - State: closed - Opened by mizuchi3 over 9 years ago - 2 comments

#119 - byAtomProp, item.prop is not a function

Issue - State: closed - Opened by mizuchi3 over 9 years ago - 4 comments

#118 - Getter methods for camera position

Issue - State: closed - Opened by harryjubb over 9 years ago - 2 comments

#117 - Serialization of Viewer

Issue - State: closed - Opened by javierbq over 9 years ago - 5 comments

#116 - create pvviewer to work with jupyter notebook

Pull Request - State: closed - Opened by aebrahim over 9 years ago - 7 comments

#115 - Translate camera with middle mouse button

Issue - State: closed - Opened by harryjubb over 9 years ago - 4 comments

#114 - LineGeom is not defined

Issue - State: closed - Opened by mizuchi3 over 9 years ago - 2 comments

#113 - Use relative path to load 1nmr.pdb file

Pull Request - State: closed - Opened by kaulkie over 9 years ago - 1 comment

#112 - Add support for visualizing electron density maps

Issue - State: open - Opened by andreasprlic over 9 years ago - 6 comments

#111 - focus on transparent element

Issue - State: closed - Opened by Traksewt over 9 years ago - 2 comments

#110 - add addResidues to MolView

Pull Request - State: closed - Opened by Traksewt over 9 years ago - 1 comment

#109 - List of PV Samples do not work

Issue - State: closed - Opened by mizuchi3 over 9 years ago - 3 comments

#108 - What about Bower ?

Issue - State: closed - Opened by grrseguin over 9 years ago - 3 comments

#107 - What are languages used to create pv?

Issue - State: closed - Opened by JeremieRousseau over 9 years ago - 2 comments

#106 - add RNA/DNA block representation

Issue - State: open - Opened by biasmv over 9 years ago

#105 - Clicks on atoms do not work

Issue - State: closed - Opened by stared over 9 years ago - 4 comments

#104 - Problems with changing opacity by atom

Issue - State: closed - Opened by stared over 9 years ago - 2 comments

#103 - Support to highlight custom region

Issue - State: closed - Opened by fabsta over 9 years ago - 17 comments

#102 - Support for displaying a MODEL/ENDMDL ensemble

Issue - State: closed - Opened by xiang-jun over 9 years ago - 9 comments

#94 - Allow residue superposition

Issue - State: closed - Opened by blakesweeney almost 10 years ago - 3 comments

#87 - colorOne is undefined

Issue - State: closed - Opened by rlowe55 almost 10 years ago - 1 comment

#71 - add examples page/gallery

Issue - State: closed - Opened by biasmv about 10 years ago
Labels: enhancement

#52 - adding highlighting, key events, Selection.

Pull Request - State: closed - Opened by Traksewt over 10 years ago - 1 comment

#47 - cleanup src/viewer.js

Issue - State: closed - Opened by biasmv over 10 years ago
Labels: enhancement, code hygiene

#24 - Visualize C alpha traces?

Issue - State: closed - Opened by mizuchi3 about 11 years ago - 2 comments
Labels: enhancement

GitHub / biasmv/pv issues and pull requests