Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bhklab/radiogx issues and pull requests

#72 - Devel

Pull Request - State: closed - Opened by jjjermiah almost 2 years ago

#71 - re-do bioc GHA

Pull Request - State: closed - Opened by jjjermiah almost 2 years ago

#70 - fixed param issue

Pull Request - State: closed - Opened by jjjermiah almost 2 years ago

#69 - radSensitivitySig works on smallCleveland, but not Cleveland

Issue - State: open - Opened by jamiedean almost 2 years ago

#68 - Feature slot rename chris

Pull Request - State: closed - Opened by ChristopherEeles almost 3 years ago

#67 - results of family are never stored?

Pull Request - State: closed - Opened by p-smirnov about 3 years ago

#66 - Font sizes of x, y labels in the plot function not working

Issue - State: closed - Opened by vmsatya over 6 years ago

#65 - Issue with rsquared value in plot function

Issue - State: closed - Opened by vmsatya about 7 years ago

#64 - Include Rsquare in the legend for the plot

Issue - State: closed - Opened by vmsatya about 7 years ago - 1 comment

#63 - Include {0Gy,1} to the plotCurve function

Issue - State: closed - Opened by vmsatya about 7 years ago - 1 comment

#62 - y axis labels for lq plot

Issue - State: closed - Opened by vmsatya about 7 years ago - 1 comment

#61 - Yard mathematical function should be added

Issue - State: closed - Opened by vmsatya about 7 years ago

#60 - Function to filter noisy LQ fit curves based on rsquare value

Issue - State: closed - Opened by vmsatya about 7 years ago

#59 - More than one curve as input to the plot function

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#58 - Y axis should be to the base 10 for plotCurve function

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#57 - Issue with optimization function

Issue - State: closed - Opened by vmsatya over 7 years ago

#56 - Radiogx Installation issue

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#55 - Critical Bug: Different results using computeAUC and LQmodel functions

Issue - State: closed - Opened by vmsatya over 7 years ago - 3 comments

#54 - Add proton therapy dose-response data

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#53 - 2 cell lines duplicated in the Yard et al. study

Issue - State: closed - Opened by vmsatya over 7 years ago

#52 - Add oxygen concentration column in the Rset

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#50 - Cleveland Rset not working

Issue - State: closed - Opened by vmsatya over 7 years ago

#49 - Compare AUC's between NLS, Normal/Cauchy, Published

Issue - State: closed - Opened by vmsatya over 7 years ago

#48 - Comparison of parameters using nls vs. linearQuadraticModel

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#46 - Round3: Beta value not taken in computeSF2 function

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#46 - Round3: Beta value not taken in computeSF2 function

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#45 - Round3: computeAUC function wrong parameters

Issue - State: closed - Opened by vmsatya over 7 years ago

#44 - Round3: Wrong AUC values

Issue - State: closed - Opened by vmsatya over 7 years ago - 5 comments

#42 - Did not import the function Trapz for AUC calculation?

Issue - State: closed - Opened by vmsatya over 7 years ago

#41 - linearQuadraticModel function removes negative SF values for the fit?

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#41 - linearQuadraticModel function removes negative SF values for the fit?

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#40 - Round3: linearQuadraticModel function not working

Issue - State: closed - Opened by vmsatya over 7 years ago

#39 - Method to calculate fitted and actual AUC

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#37 - Error in computeSF2 function

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#36 - computeSF2 should return fraction of cells

Issue - State: closed - Opened by vmsatya over 7 years ago

#33 - Error in the optimization function

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#32 - Error with the residual distributions, Cauchy vs. Normal

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#31 - Consistency of logarithm base used across all functions

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#28 - LQmodel function should not take negative values

Issue - State: closed - Opened by vmsatya over 7 years ago

#27 - Increase the default bounds for alpha and beta

Issue - State: closed - Opened by vmsatya over 7 years ago

#26 - Goodness of fit

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#25 - computeSF2 should return fraction and not in logarithmic value

Issue - State: closed - Opened by vmsatya over 7 years ago

#24 - Units of Dose (x-axis) in the LQmodel fit

Issue - State: closed - Opened by vmsatya over 7 years ago

#22 - Disable log option for the user in computeD10 function

Issue - State: closed - Opened by vmsatya over 7 years ago

#21 - Error in computeD10 function

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#20 - Disable the log option in allthe functions

Issue - State: closed - Opened by vmsatya over 7 years ago

#19 - compiteAUC gives zero

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#17 - Different AUC values for the same points

Issue - State: closed - Opened by vmsatya over 7 years ago - 4 comments

#16 - AUC for zero SF

Issue - State: closed - Opened by vmsatya over 7 years ago

#15 - AUC cannot be negative

Issue - State: closed - Opened by vmsatya over 7 years ago

#14 - Y axis wrong in the plot curve function

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#13 - Plot curve function does not plot all the points

Issue - State: closed - Opened by vmsatya over 7 years ago

#12 - Number of decimal places for alpha and beta in plot curve function

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#11 - Minimum number of points for the LQmodel fit

Issue - State: closed - Opened by vmsatya over 7 years ago

#10 - Wrong error message for same values of x and y

Issue - State: closed - Opened by vmsatya over 7 years ago

#9 - Normal vs. Cauchy distributions

Issue - State: closed - Opened by vmsatya over 7 years ago

#8 - Issue with Verbose option in the LQmodel fit

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#7 - Issue with the lower and upper bound options in the function

Issue - State: closed - Opened by vmsatya over 7 years ago

#6 - Error message for single response with multiple dose points

Issue - State: closed - Opened by vmsatya over 7 years ago - 2 comments

#5 - Cannot have a fit with a single dose-response point

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#2 - Theoretical Linear Quadratic fit returns zero values for parameters

Issue - State: closed - Opened by vmsatya over 7 years ago - 1 comment

#1 - Sanity checks on user inputs to RadioGx functions

Issue - State: closed - Opened by markcfreeman over 7 years ago