Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bhklab/orcestra issues and pull requests

#85 - Bump path-to-regexp and express

Pull Request - State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#84 - Bump send and express in /client

Pull Request - State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#83 - Bump serve-static and express in /client

Pull Request - State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#82 - Bump path-to-regexp and express in /client

Pull Request - State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#81 - Bump body-parser and express in /client

Pull Request - State: open - Opened by dependabot[bot] 5 months ago
Labels: dependencies

#80 - Bump webpack and react-scripts in /client

Pull Request - State: open - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#79 - Bump micromatch and react-scripts in /client

Pull Request - State: open - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#78 - Bump braces from 3.0.2 to 3.0.3

Pull Request - State: open - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#77 - Fixed issues with createPipeline requests to ORCESTRA-api

Pull Request - State: closed - Opened by syousafz 8 months ago

#76 - Create pipeline

Pull Request - State: closed - Opened by mattbocc 8 months ago

#75 - Updated UI for "create pipeline" in admin menu

Pull Request - State: closed - Opened by syousafz 8 months ago

#74 - Fixed formatting issues

Pull Request - State: closed - Opened by syousafz 8 months ago

#73 - minor tweaks

Pull Request - State: closed - Opened by mattbocc 8 months ago

#72 - Shahbano dev

Pull Request - State: closed - Opened by syousafz 8 months ago

#71 - Matthew dev

Pull Request - State: closed - Opened by mattbocc 8 months ago - 1 comment

#70 - Updated UI for admin profile and removed deprecated code

Pull Request - State: closed - Opened by syousafz 8 months ago - 1 comment

#69 - Mb development

Pull Request - State: closed - Opened by mattbocc over 1 year ago - 1 comment

#68 - Added radiomics dataset tab and search functionality, adjusted footer

Pull Request - State: closed - Opened by mattbocc over 1 year ago

#67 - Bump protobufjs from 6.11.3 to 6.11.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#66 - Bump word-wrap from 1.2.3 to 1.2.4 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#65 - Bump mongoose from 5.13.15 to 5.13.20

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#64 - Bump semver from 5.7.1 to 5.7.2 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#63 - Bump semver from 5.7.1 to 5.7.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#62 - Bump tough-cookie and react-scripts in /client

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#61 - Bump semver and react-scripts in /client

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#60 - Minor UI Adjustments

Pull Request - State: closed - Opened by mattbocc over 1 year ago

#59 - NCI60 RNA data misannotated

Issue - State: open - Opened by p-smirnov almost 2 years ago

#58 - Bump simple-git from 3.13.0 to 3.16.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#57 - Bump cookiejar from 2.1.3 to 2.1.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#56 - Bump json5 and react-scripts in /client

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#55 - Bump json5 and react-scripts in /client

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#54 - Bump jsonwebtoken from 8.5.1 to 9.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#53 - Bump express from 4.17.1 to 4.18.2 in /client

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#52 - Bump qs from 6.5.2 to 6.5.3 in /client

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#51 - Bump simple-git from 3.13.0 to 3.15.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#50 - Bump decode-uri-component from 0.2.0 to 0.2.2 in /client

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#49 - Bump loader-utils and react-scripts in /client

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#48 - Bump d3-color and d3 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#47 - fixed the download link in the search table

Pull Request - State: closed - Opened by mnakano over 2 years ago

#46 - Development

Pull Request - State: closed - Opened by mnakano over 2 years ago

#45 - Integrate non-immunotherapy datasets (Roche RAAN challenge)

Issue - State: closed - Opened by sisiranair over 2 years ago

#44 - Update TCGA on orcestra to be from XenaBrowser

Issue - State: open - Opened by p-smirnov almost 3 years ago

#43 - moved old-db codes to old-db folder for backup

Pull Request - State: closed - Opened by mnakano almost 3 years ago

#42 - Updated API to adapt to new DB data structure

Pull Request - State: closed - Opened by mnakano almost 3 years ago

#41 - Updated API to adapt to new DB data structure

Pull Request - State: closed - Opened by mnakano almost 3 years ago

#40 - Bump async from 2.6.3 to 2.6.4 in /client

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#39 - Bump urijs from 1.19.6 to 1.19.11 in /client

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#38 - Bump minimist from 1.2.5 to 1.2.6 in /client

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#37 - Bump url-parse from 1.5.1 to 1.5.7 in /client

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#36 - Bump follow-redirects from 1.14.6 to 1.14.8 in /client

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#35 - Problem with gene symbols in CCLE (and possibly other PSets)

Issue - State: open - Opened by bhaibeka about 3 years ago - 2 comments
Labels: bug

#34 - Wrong GDSC array in canonical PSets

Issue - State: closed - Opened by p-smirnov about 3 years ago - 2 comments

#34 - Wrong GDSC array in canonical PSets

Issue - State: closed - Opened by p-smirnov about 3 years ago - 2 comments

#33 - Microarray type for GDSC does not affect search/filtering

Issue - State: open - Opened by p-smirnov about 3 years ago

#32 - Development

Pull Request - State: closed - Opened by mnakano about 3 years ago

#31 - Bump axios from 0.21.1 to 0.21.2 in /client

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#30 - Development

Pull Request - State: closed - Opened by mnakano about 3 years ago

#29 - BeatAML SMILES missing

Issue - State: closed - Opened by SafiaSafa over 3 years ago - 2 comments

#28 - Annotation of eset in BeatAML is also incorrectly set

Issue - State: open - Opened by p-smirnov over 3 years ago

#27 - Non-UTF byte in CCLE drugInfo

Issue - State: open - Opened by ChristopherEeles over 3 years ago - 1 comment

#26 - BeatAML pset is missing tissueid in cellInfo.

Issue - State: open - Opened by p-smirnov over 3 years ago - 1 comment

#24 - gCSI 2019 does not have published statistics included in dataset

Issue - State: closed - Opened by p-smirnov over 3 years ago - 1 comment

#23 - Available PSets API is broken when `canonical=FALSE`

Issue - State: closed - Opened by ChristopherEeles over 3 years ago - 4 comments

#23 - Available PSets API is broken when `canonical=FALSE`

Issue - State: closed - Opened by ChristopherEeles over 3 years ago - 4 comments

#21 - submitting without login fails?

Issue - State: open - Opened by p-smirnov almost 4 years ago - 1 comment
Labels: bug

#19 - Bump y18n from 3.2.1 to 3.2.2

Pull Request - State: closed - Opened by dependabot[bot] almost 4 years ago - 1 comment
Labels: dependencies

#18 - Bump y18n from 4.0.0 to 4.0.1 in /client

Pull Request - State: closed - Opened by dependabot[bot] almost 4 years ago - 1 comment
Labels: dependencies

#17 - Rename Gender to Sex in all PSets

Issue - State: open - Opened by ChristopherEeles almost 4 years ago - 1 comment

#16 - fusion data missing for CCLE

Issue - State: open - Opened by p-smirnov almost 4 years ago

#15 - Bump elliptic from 6.5.3 to 6.5.4 in /client

Pull Request - State: closed - Opened by dependabot[bot] almost 4 years ago - 1 comment
Labels: dependencies

#14 - Bump axios from 0.19.0 to 0.21.1 in /client

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#13 - Bump express-fileupload from 1.1.6 to 1.1.10

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#12 - Update gCSI2018 pipeline to use SummarizedExperiments

Issue - State: open - Opened by p-smirnov about 4 years ago

#11 - Expired SSL Certificate

Issue - State: closed - Opened by ChristopherEeles over 4 years ago - 1 comment

#10 - Incorrect mutation data for gCSI_2017

Issue - State: open - Opened by ChristopherEeles over 4 years ago - 4 comments

#9 - Bump node-fetch from 2.6.0 to 2.6.1

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#8 - Bump http-proxy from 1.18.0 to 1.18.1 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#7 - Bump bl from 2.2.0 to 2.2.1

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#6 - Bump express-fileupload from 1.1.6 to 1.1.9

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#5 - Bump elliptic from 6.5.2 to 6.5.3 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#4 - Bump lodash from 4.17.15 to 4.17.19

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#3 - Bump lodash from 4.17.15 to 4.17.19 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#2 - Broken links on statistics page to each dataset

Issue - State: closed - Opened by p-smirnov over 4 years ago

#1 - Bump websocket-extensions from 0.1.3 to 0.1.4 in /client

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago
Labels: dependencies