Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bhklab/med-imagetools issues and pull requests

#123 - Bump actions/download-artifact from 2 to 4.1.7 in /.github/workflows

Pull Request - State: open - Opened by dependabot[bot] about 1 month ago
Labels: dependencies, github_actions

#122 - removing old Dataset class

Pull Request - State: closed - Opened by skim2257 about 2 months ago - 1 comment

#121 - Seg support

Pull Request - State: closed - Opened by skim2257 2 months ago - 1 comment

#120 - Bump scikit-learn from 1.4.2 to 1.5.0

Pull Request - State: open - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#119 - fix: License updated to MIT

Pull Request - State: closed - Opened by skim2257 4 months ago - 1 comment

#118 - fix: Clarified license in README.md

Pull Request - State: closed - Opened by skim2257 4 months ago - 1 comment

#117 - Please clarify the license that covers this code

Issue - State: closed - Opened by fedorov 4 months ago - 7 comments

#116 - patch: pushing to 1.4.1

Pull Request - State: closed - Opened by skim2257 4 months ago - 1 comment

#115 - Fix

Pull Request - State: closed - Opened by skim2257 4 months ago

#114 - feat: semantic release

Pull Request - State: closed - Opened by skim2257 4 months ago - 1 comment

#113 - fix: semantic versioning

Pull Request - State: closed - Opened by skim2257 4 months ago - 1 comment

#112 - Dev

Pull Request - State: closed - Opened by skim2257 4 months ago - 1 comment

#111 - Dev

Pull Request - State: closed - Opened by skim2257 5 months ago - 1 comment

#110 - Dev

Pull Request - State: closed - Opened by skim2257 5 months ago

#109 - Dev

Pull Request - State: closed - Opened by skim2257 5 months ago

#108 - kill bob the builder

Pull Request - State: closed - Opened by skim2257 5 months ago

#107 - Substantial refactoring, linting, CI/CD updates

Pull Request - State: closed - Opened by skim2257 5 months ago

#106 - Switching to poetry + ruff

Pull Request - State: closed - Opened by skim2257 5 months ago

#105 - New tests, improving code coverage.

Pull Request - State: closed - Opened by skim2257 6 months ago

#104 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#103 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#102 - MIT lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#101 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#100 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#99 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#98 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#97 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#96 - Mit lite

Pull Request - State: closed - Opened by skim2257 8 months ago

#95 - Detached branch (#94)

Pull Request - State: closed - Opened by skim2257 8 months ago

#94 - Detached branch

Pull Request - State: closed - Opened by skim2257 8 months ago

#93 - Flake8 linting fixes

Pull Request - State: closed - Opened by skim2257 10 months ago

#92 - Update README.md

Pull Request - State: open - Opened by skim2257 about 1 year ago

#91 - Add CT-SEG to Datagraph

Pull Request - State: open - Opened by uyousafzai54 over 1 year ago - 2 comments

#90 - Sarc dev fixing crawl function

Pull Request - State: open - Opened by strixy16 over 1 year ago

#89 - convert to dicom

Pull Request - State: closed - Opened by RuiyanNi over 1 year ago

#88 - accept .Dcm in crawl_one

Pull Request - State: closed - Opened by strixy16 over 1 year ago

#87 - Crawl portion of autopipeline misses CT and RTSTRUCT files

Issue - State: open - Opened by strixy16 over 1 year ago - 2 comments

#86 - DICOM-Segmentation Module IO

Issue - State: open - Opened by skim2257 over 1 year ago - 1 comment

#85 - Create internal list of dataset directory

Issue - State: open - Opened by skim2257 over 1 year ago - 1 comment

#84 - RTSTRUCT QC Check

Issue - State: open - Opened by skim2257 over 1 year ago

#83 - QC checks to output FAILURE

Issue - State: open - Opened by skim2257 over 1 year ago

#82 - make to-dos from description

Issue - State: open - Opened by skim2257 over 1 year ago

#81 - test break during demo

Pull Request - State: closed - Opened by skim2257 over 1 year ago

#80 - Add stop_before_pixels tag and set to True to speed up dcm reads

Pull Request - State: closed - Opened by uyousafzai54 over 1 year ago

#79 - Processing RTPLAN modality

Issue - State: open - Opened by SWKoreaBME over 1 year ago - 1 comment

#78 - Dicom seg

Pull Request - State: closed - Opened by skim2257 over 1 year ago

#77 - Dicom seg

Pull Request - State: closed - Opened by skim2257 over 1 year ago

#76 - Error when forming edge table

Issue - State: open - Opened by JoshuaSiraj over 1 year ago - 1 comment

#75 - How can I ignore files/subjects with error?

Issue - State: closed - Opened by SWKoreaBME over 1 year ago - 3 comments
Labels: question

#74 - DICOM-SEG beta commit

Pull Request - State: closed - Opened by skim2257 over 1 year ago - 1 comment

#73 - Add docstrings to Segmentation init

Pull Request - State: closed - Opened by LaiaPomar over 1 year ago

#72 - Add raw roi columns

Pull Request - State: closed - Opened by LaiaPomar over 1 year ago

#71 - Add mr crawls

Pull Request - State: closed - Opened by skim2257 over 1 year ago

#69 - Delete the labels that are empty

Pull Request - State: closed - Opened by LaiaPomar over 1 year ago

#68 - Autopipeline fix

Pull Request - State: closed - Opened by LaiaPomar almost 2 years ago

#67 - hotfix

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#66 - Crawl orientation

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#65 - added orientation DICOM tag crawling

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#64 - nnunet flags hotfix

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#63 - added --update flag, needs test

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#62 - Does autopipeline take care of the position of the input dicoms

Issue - State: open - Opened by SWKoreaBME almost 2 years ago - 3 comments
Labels: enhancement

#61 - Subseries

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#60 - Sw fix

Pull Request - State: closed - Opened by SWKoreaBME almost 2 years ago

#59 - Skim2257 patch 1

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#58 - Update README.md

Pull Request - State: closed - Opened by skim2257 almost 2 years ago

#57 - Making duplicated subject folder

Issue - State: closed - Opened by SWKoreaBME about 2 years ago

#56 - adding test param for better QC

Pull Request - State: closed - Opened by skim2257 about 2 years ago

#54 - Update setup.py

Pull Request - State: closed - Opened by skim2257 about 2 years ago

#53 - Using a custom dataset for the autopipeline

Issue - State: closed - Opened by SWKoreaBME about 2 years ago - 4 comments

#52 - 1.0.0

Pull Request - State: closed - Opened by skim2257 about 2 years ago

#51 - Documentation

Pull Request - State: open - Opened by skim2257 about 2 years ago

#50 - Documentation

Pull Request - State: closed - Opened by fishingguy456 about 2 years ago

#49 - 0.4.4

Pull Request - State: closed - Opened by skim2257 about 2 years ago

#48 - Markdown Report and new CLI options

Pull Request - State: closed - Opened by fishingguy456 about 2 years ago - 1 comment

#47 - Markdown Report, new CLI options

Pull Request - State: closed - Opened by fishingguy456 about 2 years ago

#46 - continue and dry run flags

Pull Request - State: closed - Opened by fishingguy456 about 2 years ago

#45 - autopipeline failure to save RTStruct due to name containing invalid character "<"

Issue - State: closed - Opened by jpeoples about 2 years ago - 2 comments

#43 - Update readme

Pull Request - State: closed - Opened by skim2257 about 2 years ago

#42 - Markdown report

Pull Request - State: closed - Opened by skim2257 about 2 years ago

#41 - Nnunet demo

Pull Request - State: closed - Opened by fishingguy456 about 2 years ago

#40 - Nnunet demo

Pull Request - State: closed - Opened by fishingguy456 over 2 years ago

#39 - Ci update

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#38 - post-rebase

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#37 - Update setup.py

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#36 - Kevin branch

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#35 - update to 0.4.1 for new readme

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#34 - Kevin branch

Pull Request - State: closed - Opened by fishingguy456 over 2 years ago

#33 - still kinda failing...

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#32 - Change output folder structure + segmentation to be:

Issue - State: closed - Opened by skim2257 over 2 years ago

#31 - New edge type (RTDOSE-RTPLAN)

Issue - State: closed - Opened by skim2257 over 2 years ago

#30 - Kevin branch

Pull Request - State: closed - Opened by fishingguy456 over 2 years ago

#29 - Pipeline Template Updates

Issue - State: open - Opened by skim2257 over 2 years ago - 1 comment
Labels: documentation, enhancement

#28 - Data Graph title HTML not showing up properly

Issue - State: open - Opened by fishingguy456 over 2 years ago

#27 - read_dicom_auto notes

Issue - State: closed - Opened by skim2257 over 2 years ago - 1 comment

#26 - Skim2257 quick fix

Pull Request - State: closed - Opened by skim2257 over 2 years ago

#25 - Skim2257 patch 1

Pull Request - State: closed - Opened by skim2257 over 2 years ago