Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / bhklab/med-imagetools issues and pull requests
#124 - Crawl misses files if multiple studies present for single patient directory
Issue -
State: open - Opened by strixy16 19 days ago
#123 - Bump actions/download-artifact from 2 to 4.1.7 in /.github/workflows
Pull Request -
State: open - Opened by dependabot[bot] about 1 month ago
Labels: dependencies, github_actions
#122 - removing old Dataset class
Pull Request -
State: closed - Opened by skim2257 about 2 months ago
- 1 comment
#121 - Seg support
Pull Request -
State: closed - Opened by skim2257 2 months ago
- 1 comment
#120 - Bump scikit-learn from 1.4.2 to 1.5.0
Pull Request -
State: open - Opened by dependabot[bot] 4 months ago
Labels: dependencies
#119 - fix: License updated to MIT
Pull Request -
State: closed - Opened by skim2257 4 months ago
- 1 comment
#118 - fix: Clarified license in README.md
Pull Request -
State: closed - Opened by skim2257 4 months ago
- 1 comment
#117 - Please clarify the license that covers this code
Issue -
State: closed - Opened by fedorov 4 months ago
- 7 comments
#116 - patch: pushing to 1.4.1
Pull Request -
State: closed - Opened by skim2257 4 months ago
- 1 comment
#115 - Fix
Pull Request -
State: closed - Opened by skim2257 4 months ago
#114 - feat: semantic release
Pull Request -
State: closed - Opened by skim2257 4 months ago
- 1 comment
#113 - fix: semantic versioning
Pull Request -
State: closed - Opened by skim2257 4 months ago
- 1 comment
#112 - Dev
Pull Request -
State: closed - Opened by skim2257 4 months ago
- 1 comment
#111 - Dev
Pull Request -
State: closed - Opened by skim2257 5 months ago
- 1 comment
#110 - Dev
Pull Request -
State: closed - Opened by skim2257 5 months ago
#109 - Dev
Pull Request -
State: closed - Opened by skim2257 5 months ago
#108 - kill bob the builder
Pull Request -
State: closed - Opened by skim2257 5 months ago
#107 - Substantial refactoring, linting, CI/CD updates
Pull Request -
State: closed - Opened by skim2257 5 months ago
#106 - Switching to poetry + ruff
Pull Request -
State: closed - Opened by skim2257 5 months ago
#105 - New tests, improving code coverage.
Pull Request -
State: closed - Opened by skim2257 6 months ago
#104 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#103 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#102 - MIT lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#101 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#100 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#99 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#98 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#97 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#96 - Mit lite
Pull Request -
State: closed - Opened by skim2257 8 months ago
#95 - Detached branch (#94)
Pull Request -
State: closed - Opened by skim2257 8 months ago
#94 - Detached branch
Pull Request -
State: closed - Opened by skim2257 8 months ago
#93 - Flake8 linting fixes
Pull Request -
State: closed - Opened by skim2257 10 months ago
#92 - Update README.md
Pull Request -
State: open - Opened by skim2257 about 1 year ago
#91 - Add CT-SEG to Datagraph
Pull Request -
State: open - Opened by uyousafzai54 over 1 year ago
- 2 comments
#90 - Sarc dev fixing crawl function
Pull Request -
State: open - Opened by strixy16 over 1 year ago
#89 - convert to dicom
Pull Request -
State: closed - Opened by RuiyanNi over 1 year ago
#88 - accept .Dcm in crawl_one
Pull Request -
State: closed - Opened by strixy16 over 1 year ago
#87 - Crawl portion of autopipeline misses CT and RTSTRUCT files
Issue -
State: open - Opened by strixy16 over 1 year ago
- 2 comments
#86 - DICOM-Segmentation Module IO
Issue -
State: open - Opened by skim2257 over 1 year ago
- 1 comment
#85 - Create internal list of dataset directory
Issue -
State: open - Opened by skim2257 over 1 year ago
- 1 comment
#84 - RTSTRUCT QC Check
Issue -
State: open - Opened by skim2257 over 1 year ago
#83 - QC checks to output FAILURE
Issue -
State: open - Opened by skim2257 over 1 year ago
#82 - make to-dos from description
Issue -
State: open - Opened by skim2257 over 1 year ago
#81 - test break during demo
Pull Request -
State: closed - Opened by skim2257 over 1 year ago
#80 - Add stop_before_pixels tag and set to True to speed up dcm reads
Pull Request -
State: closed - Opened by uyousafzai54 over 1 year ago
#79 - Processing RTPLAN modality
Issue -
State: open - Opened by SWKoreaBME over 1 year ago
- 1 comment
#78 - Dicom seg
Pull Request -
State: closed - Opened by skim2257 over 1 year ago
#77 - Dicom seg
Pull Request -
State: closed - Opened by skim2257 over 1 year ago
#76 - Error when forming edge table
Issue -
State: open - Opened by JoshuaSiraj over 1 year ago
- 1 comment
#75 - How can I ignore files/subjects with error?
Issue -
State: closed - Opened by SWKoreaBME over 1 year ago
- 3 comments
Labels: question
#74 - DICOM-SEG beta commit
Pull Request -
State: closed - Opened by skim2257 over 1 year ago
- 1 comment
#73 - Add docstrings to Segmentation init
Pull Request -
State: closed - Opened by LaiaPomar over 1 year ago
#72 - Add raw roi columns
Pull Request -
State: closed - Opened by LaiaPomar over 1 year ago
#71 - Add mr crawls
Pull Request -
State: closed - Opened by skim2257 over 1 year ago
#70 - added 5 MR tags: RepetitionTime, EchoTime, ScanSequence, MagneticFiel…
Pull Request -
State: closed - Opened by skim2257 over 1 year ago
#69 - Delete the labels that are empty
Pull Request -
State: closed - Opened by LaiaPomar over 1 year ago
#68 - Autopipeline fix
Pull Request -
State: closed - Opened by LaiaPomar almost 2 years ago
#67 - hotfix
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#66 - Crawl orientation
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#65 - added orientation DICOM tag crawling
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#64 - nnunet flags hotfix
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#63 - added --update flag, needs test
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#62 - Does autopipeline take care of the position of the input dicoms
Issue -
State: open - Opened by SWKoreaBME almost 2 years ago
- 3 comments
Labels: enhancement
#61 - Subseries
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#60 - Sw fix
Pull Request -
State: closed - Opened by SWKoreaBME almost 2 years ago
#59 - Skim2257 patch 1
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#58 - Update README.md
Pull Request -
State: closed - Opened by skim2257 almost 2 years ago
#57 - Making duplicated subject folder
Issue -
State: closed - Opened by SWKoreaBME about 2 years ago
#56 - adding test param for better QC
Pull Request -
State: closed - Opened by skim2257 about 2 years ago
#55 - Error with custom pipeline inside main script module (`joblib.externals.loky.process_executor.BrokenProcessPool`)
Issue -
State: closed - Opened by jpeoples about 2 years ago
- 4 comments
#54 - Update setup.py
Pull Request -
State: closed - Opened by skim2257 about 2 years ago
#53 - Using a custom dataset for the autopipeline
Issue -
State: closed - Opened by SWKoreaBME about 2 years ago
- 4 comments
#52 - 1.0.0
Pull Request -
State: closed - Opened by skim2257 about 2 years ago
#51 - Documentation
Pull Request -
State: open - Opened by skim2257 about 2 years ago
#50 - Documentation
Pull Request -
State: closed - Opened by fishingguy456 about 2 years ago
#49 - 0.4.4
Pull Request -
State: closed - Opened by skim2257 about 2 years ago
#48 - Markdown Report and new CLI options
Pull Request -
State: closed - Opened by fishingguy456 about 2 years ago
- 1 comment
#47 - Markdown Report, new CLI options
Pull Request -
State: closed - Opened by fishingguy456 about 2 years ago
#46 - continue and dry run flags
Pull Request -
State: closed - Opened by fishingguy456 about 2 years ago
#45 - autopipeline failure to save RTStruct due to name containing invalid character "<"
Issue -
State: closed - Opened by jpeoples about 2 years ago
- 2 comments
#44 - autopipeline failure on CRLM dataset due to series with too few slices during Image Smoothing/resampling
Issue -
State: closed - Opened by jpeoples about 2 years ago
- 1 comment
#43 - Update readme
Pull Request -
State: closed - Opened by skim2257 about 2 years ago
#42 - Markdown report
Pull Request -
State: closed - Opened by skim2257 about 2 years ago
#41 - Nnunet demo
Pull Request -
State: closed - Opened by fishingguy456 about 2 years ago
#40 - Nnunet demo
Pull Request -
State: closed - Opened by fishingguy456 over 2 years ago
#39 - Ci update
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#38 - post-rebase
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#37 - Update setup.py
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#36 - Kevin branch
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#35 - update to 0.4.1 for new readme
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#34 - Kevin branch
Pull Request -
State: closed - Opened by fishingguy456 over 2 years ago
#33 - still kinda failing...
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#32 - Change output folder structure + segmentation to be:
Issue -
State: closed - Opened by skim2257 over 2 years ago
#31 - New edge type (RTDOSE-RTPLAN)
Issue -
State: closed - Opened by skim2257 over 2 years ago
#30 - Kevin branch
Pull Request -
State: closed - Opened by fishingguy456 over 2 years ago
#29 - Pipeline Template Updates
Issue -
State: open - Opened by skim2257 over 2 years ago
- 1 comment
Labels: documentation, enhancement
#28 - Data Graph title HTML not showing up properly
Issue -
State: open - Opened by fishingguy456 over 2 years ago
#27 - read_dicom_auto notes
Issue -
State: closed - Opened by skim2257 over 2 years ago
- 1 comment
#26 - Skim2257 quick fix
Pull Request -
State: closed - Opened by skim2257 over 2 years ago
#25 - Skim2257 patch 1
Pull Request -
State: closed - Opened by skim2257 over 2 years ago