bgruening/galaxytools issues and pull requests

#1393 - Updating tools/agat from version 1.2.0 to 1.4.0

Pull Request - State: closed - Opened by gxydevbot 9 months ago - 1 comment

#1392 - Update Cellpose wrapper name and description

Pull Request - State: closed - Opened by kostrykin 9 months ago - 1 comment

#1391 - Add tool for analysing images using Bioimage AI models

Pull Request - State: closed - Opened by anuprulez 9 months ago - 10 comments

#1390 - Add Cellpose v3.0.1

Pull Request - State: closed - Opened by pavanvidem 9 months ago

#1389 - Genbank file is not optional

Issue - State: open - Opened by mthang 9 months ago - 4 comments

#1388 - Tapscan update

Pull Request - State: closed - Opened by shiltemann 9 months ago - 1 comment

#1387 - Many tools specify `format="text"` as data inputs or outputs

Issue - State: open - Opened by mvdbeek 9 months ago

#1386 - Updating tools/antismash from version 6.1.1 to 7.1.0

Pull Request - State: open - Opened by gxydevbot 9 months ago - 7 comments

#1385 - update text processing tools

Pull Request - State: closed - Opened by bgruening 9 months ago - 1 comment

#1384 - Update reago.xml

Pull Request - State: open - Opened by paulzierep 10 months ago - 1 comment

#1383 - Add juicebox_hic format and citation

Pull Request - State: closed - Opened by fubar2 10 months ago

#1382 - Cool to hic

Pull Request - State: closed - Opened by fubar2 10 months ago - 5 comments

#1381 - Cool to hic

Pull Request - State: closed - Opened by fubar2 10 months ago - 1 comment

#1380 - Updating tools/image_processing/graphicsmagick from version 1.3.40 to 1.3.42

Pull Request - State: closed - Opened by gxydevbot 10 months ago

#1379 - Updating tools/cpat from version 3.0.4 to 3.0.5

Pull Request - State: closed - Opened by gxydevbot 10 months ago

#1378 - bump intarna 3.4.0

Pull Request - State: closed - Opened by martin-raden 10 months ago

#1377 - AGAT - Add new feature (functional annotation)

Pull Request - State: closed - Opened by rlibouba 10 months ago - 3 comments

#1376 - add nl

Pull Request - State: closed - Opened by bernt-matthias 10 months ago - 3 comments

#1375 - Add header

Pull Request - State: closed - Opened by Marie59 10 months ago - 7 comments

#1374 - hifiasm: fix typo in param documentation

Pull Request - State: closed - Opened by abueg 10 months ago

#1373 - gm updates

Pull Request - State: closed - Opened by bgruening 11 months ago

#1372 - bump flye to 2.9.3

Pull Request - State: closed - Opened by thanhleviet 11 months ago - 10 comments

#1371 - Integrate another bioMLmodel (biomd0000001076)

Pull Request - State: closed - Opened by anuprulez 11 months ago - 6 comments

#1370 - agat_sp_keep_longest_isoform.pl needed

Issue - State: open - Opened by bgruening 11 months ago

#1369 - update to v081

Pull Request - State: closed - Opened by michauhl 12 months ago

#1368 - Change query params according mavedb requirements

Pull Request - State: closed - Opened by PlushZ 12 months ago - 2 comments

#1367 - add mavedb data source tool

Pull Request - State: closed - Opened by PlushZ 12 months ago - 3 comments

#1366 - update v08 to fix meme version check error

Pull Request - State: closed - Opened by michauhl 12 months ago

#1365 - Integration of a few BioModels (ML models)

Issue - State: open - Opened by anuprulez 12 months ago

#1364 - Add palette options to convert

Pull Request - State: closed - Opened by hexylena 12 months ago - 1 comment

#1363 - Updating chemicaltoolbox/autodock_vina/docking from version 1.2.3 to 1.2.5

Pull Request - State: open - Opened by gxydevbot 12 months ago - 8 comments

#1362 - update rbpbench tool-data conf

Pull Request - State: closed - Opened by pavanvidem 12 months ago - 1 comment

#1361 - bumped to 2.9.3

Pull Request - State: closed - Opened by thanhleviet 12 months ago - 3 comments

#1360 - Add RBPBench tool wrapper

Pull Request - State: closed - Opened by michauhl 12 months ago - 6 comments

#1359 - Update Nanopolish to v0.14

Pull Request - State: closed - Opened by tuncK about 1 year ago - 10 comments

#1358 - Fix two bugs with `split_file_to_collection`

Pull Request - State: closed - Opened by simonbray about 1 year ago

#1357 - Add TAPscan

Pull Request - State: closed - Opened by shiltemann about 1 year ago - 9 comments

#1356 - tool for wound healing scratch assay image analysis

Pull Request - State: closed - Opened by sunyi000 about 1 year ago - 5 comments

#1355 - Integration of RF model to predict efficacy of immune checkpoint blockade (BioModels)

Pull Request - State: closed - Opened by anuprulez about 1 year ago

#1354 - Updating tools/tgsgapcloser from version 1.0.3 to 1.2.1

Pull Request - State: closed - Opened by nsoranzo about 1 year ago - 5 comments

#1354 - Updating tools/tgsgapcloser from version 1.0.3 to 1.2.1

Pull Request - State: closed - Opened by nsoranzo about 1 year ago - 5 comments

#1353 - Updating tools/nextdenovo from version 2.5.0 to 2.5.2

Pull Request - State: closed - Opened by nsoranzo about 1 year ago - 5 comments