Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bgruening/docker-galaxy issues and pull requests

#619 - psycopg2 issue during startup

Issue - State: open - Opened by jtdbod 23 days ago

#618 - How to launch interactive tool

Issue - State: open - Opened by amufaamo about 1 month ago

#617 - Run CVMFS in a seperate container

Issue - State: open - Opened by bgruening about 1 month ago
Labels: enhancement

#616 - Has link to mulled changed?

Issue - State: closed - Opened by jmelott about 2 months ago - 1 comment

#615 - Purging users and old non-deleted data.

Issue - State: closed - Opened by jtdbod 2 months ago - 2 comments

#614 - 24.2 is coming

Pull Request - State: closed - Opened by bgruening 3 months ago - 4 comments

#613 - Remove old website files

Pull Request - State: closed - Opened by arash77 3 months ago

#612 - Update site github action workflow

Pull Request - State: closed - Opened by arash77 3 months ago

#611 - 24.1 pending tasks

Pull Request - State: closed - Opened by jyotipm29 3 months ago

#610 - repair the website

Issue - State: closed - Opened by bgruening 3 months ago - 1 comment

#609 - ideas for a new 24.x version

Issue - State: open - Opened by bgruening 4 months ago - 7 comments

#609 - ideas for a new 24.x version

Issue - State: open - Opened by bgruening 4 months ago - 7 comments

#608 - bump to 24.1 - Compose setup

Pull Request - State: closed - Opened by jyotipm29 4 months ago - 3 comments

#608 - bump to 24.1 - Compose setup

Pull Request - State: closed - Opened by jyotipm29 4 months ago - 3 comments

#607 - bump to 24.1 - Single-container setup

Pull Request - State: closed - Opened by jyotipm29 5 months ago - 35 comments

#605 - ERROR: Process docker: no such file

Issue - State: closed - Opened by potant over 1 year ago - 1 comment

#605 - ERROR: Process docker: no such file

Issue - State: closed - Opened by potant over 1 year ago - 1 comment

#604 - unable to start container

Issue - State: closed - Opened by GuilhemSempere over 1 year ago - 1 comment

#604 - unable to start container

Issue - State: closed - Opened by GuilhemSempere over 1 year ago - 1 comment

#602 - Can't download file from urls

Issue - State: closed - Opened by H1207953831 almost 2 years ago - 1 comment

#602 - Can't download file from urls

Issue - State: closed - Opened by H1207953831 almost 2 years ago - 1 comment

#599 - Production use?

Issue - State: closed - Opened by meowcat about 2 years ago - 1 comment

#599 - Production use?

Issue - State: closed - Opened by meowcat about 2 years ago - 1 comment

#597 - Fix for start failure

Issue - State: closed - Opened by benjaminbrumbaugh over 2 years ago - 1 comment

#597 - Fix for start failure

Issue - State: closed - Opened by benjaminbrumbaugh over 2 years ago - 1 comment

#594 - Custom welcome.html is not displaying?

Issue - State: closed - Opened by ZimmerA almost 3 years ago - 1 comment

#594 - Custom welcome.html is not displaying?

Issue - State: closed - Opened by ZimmerA almost 3 years ago - 1 comment

#592 - Dontainer not starting after copying

Issue - State: closed - Opened by cass436 about 3 years ago - 1 comment

#592 - Dontainer not starting after copying

Issue - State: closed - Opened by cass436 about 3 years ago - 1 comment

#591 - Unstable running of standalone galaxy setup as Azure App Service

Issue - State: closed - Opened by kdudani-tibco about 3 years ago - 1 comment

#591 - Unstable running of standalone galaxy setup as Azure App Service

Issue - State: closed - Opened by kdudani-tibco about 3 years ago - 1 comment

#588 - python 3.8 and futures 3.1.1 not working well together

Issue - State: closed - Opened by gad83 over 3 years ago - 8 comments

#588 - python 3.8 and futures 3.1.1 not working well together

Issue - State: closed - Opened by gad83 over 3 years ago - 8 comments

#587 - Docker galaxy cannot be installed and started correctly

Issue - State: closed - Opened by shenweiyan over 3 years ago - 9 comments

#587 - Docker galaxy cannot be installed and started correctly

Issue - State: closed - Opened by shenweiyan over 3 years ago - 9 comments

#586 - Fix galaxy-server/Dockerfile to be supported on RHEL8 with podman

Pull Request - State: closed - Opened by forgetfr over 3 years ago - 1 comment

#586 - Fix galaxy-server/Dockerfile to be supported on RHEL8 with podman

Pull Request - State: closed - Opened by forgetfr over 3 years ago - 1 comment

#585 - error in attmap setup command: use_2to3 is invalid

Issue - State: closed - Opened by gad83 over 3 years ago - 3 comments

#585 - error in attmap setup command: use_2to3 is invalid

Issue - State: closed - Opened by gad83 over 3 years ago - 3 comments

#584 - Pre-installing tools in the tool_conf via conda

Issue - State: closed - Opened by ebolyen over 3 years ago - 1 comment

#584 - Pre-installing tools in the tool_conf via conda

Issue - State: closed - Opened by ebolyen over 3 years ago - 1 comment

#583 - Docker-galaxy doesn't work

Issue - State: closed - Opened by deoliveiralf almost 4 years ago - 3 comments

#583 - Docker-galaxy doesn't work

Issue - State: closed - Opened by deoliveiralf almost 4 years ago - 3 comments

#571 - 403/Forbidden and "Could not open job state file"

Issue - State: closed - Opened by marco-brandizi over 4 years ago - 7 comments

#571 - 403/Forbidden and "Could not open job state file"

Issue - State: closed - Opened by marco-brandizi over 4 years ago - 7 comments

#570 - Brewing flavors - tools installing but not seen in tool panel.

Issue - State: closed - Opened by MoHeydarian-MS over 4 years ago - 1 comment

#570 - Brewing flavors - tools installing but not seen in tool panel.

Issue - State: closed - Opened by MoHeydarian-MS over 4 years ago - 1 comment

#566 - Labels

Issue - State: closed - Opened by fabianomenegidio over 4 years ago - 1 comment

#566 - Labels

Issue - State: closed - Opened by fabianomenegidio over 4 years ago - 1 comment

#562 - Database problems with startup and startup_lite

Issue - State: closed - Opened by bedroesb over 4 years ago - 19 comments

#562 - Database problems with startup and startup_lite

Issue - State: closed - Opened by bedroesb over 4 years ago - 19 comments

#552 - Unresolved paths to some images, e.g `static/style/blue/ok_small.png`

Issue - State: closed - Opened by fgp almost 5 years ago - 1 comment

#552 - Unresolved paths to some images, e.g `static/style/blue/ok_small.png`

Issue - State: closed - Opened by fgp almost 5 years ago - 1 comment

#548 - About can't use reference genome in docker.

Issue - State: closed - Opened by jackycsie almost 5 years ago - 1 comment

#548 - About can't use reference genome in docker.

Issue - State: closed - Opened by jackycsie almost 5 years ago - 1 comment

#544 - File upload not working

Issue - State: closed - Opened by VangelisTheodorakis about 5 years ago - 1 comment

#544 - File upload not working

Issue - State: closed - Opened by VangelisTheodorakis about 5 years ago - 1 comment

#538 - Create a docker image from a running container

Issue - State: closed - Opened by mohan-XD about 5 years ago - 1 comment

#538 - Create a docker image from a running container

Issue - State: closed - Opened by mohan-XD about 5 years ago - 1 comment

#532 - Configure postgres to make incremental backups by default

Issue - State: open - Opened by chambm over 5 years ago - 2 comments

#532 - Configure postgres to make incremental backups by default

Issue - State: open - Opened by chambm over 5 years ago - 2 comments

#522 - wrong permissions on /galaxy/upload_store

Issue - State: closed - Opened by tdudgeon over 5 years ago - 1 comment

#522 - wrong permissions on /galaxy/upload_store

Issue - State: closed - Opened by tdudgeon over 5 years ago - 1 comment

#518 - metadata detection for biom1 went wrong

Issue - State: closed - Opened by vebaev over 5 years ago - 1 comment

#518 - metadata detection for biom1 went wrong

Issue - State: closed - Opened by vebaev over 5 years ago - 1 comment

#516 - Virtualenv failing

Issue - State: closed - Opened by innovate-invent over 5 years ago - 1 comment

#516 - Virtualenv failing

Issue - State: closed - Opened by innovate-invent over 5 years ago - 1 comment

#512 - WIP: More modular testing infrastructure

Pull Request - State: closed - Opened by bgruening over 5 years ago

#512 - WIP: More modular testing infrastructure

Pull Request - State: closed - Opened by bgruening over 5 years ago

#510 - Docker local tool does not detect available dataset

Issue - State: closed - Opened by mhabsaoui over 5 years ago - 1 comment

#510 - Docker local tool does not detect available dataset

Issue - State: closed - Opened by mhabsaoui over 5 years ago - 1 comment

#498 - Document or link to documentation for installing tools

Issue - State: open - Opened by innovate-invent almost 6 years ago - 3 comments

#498 - Document or link to documentation for installing tools

Issue - State: open - Opened by innovate-invent almost 6 years ago - 3 comments

#493 - how to use centos7.5 base image insted of ubuntu

Issue - State: closed - Opened by deo999 almost 6 years ago - 10 comments

#493 - how to use centos7.5 base image insted of ubuntu

Issue - State: closed - Opened by deo999 almost 6 years ago - 10 comments

#489 - Bowtie2 Unable to finish job

Issue - State: closed - Opened by lavrovSA almost 6 years ago - 14 comments

#489 - Bowtie2 Unable to finish job

Issue - State: closed - Opened by lavrovSA almost 6 years ago - 14 comments

#488 - Runnining docker-tool in galaxy-docker

Issue - State: closed - Opened by olanag1 almost 6 years ago - 3 comments

#488 - Runnining docker-tool in galaxy-docker

Issue - State: closed - Opened by olanag1 almost 6 years ago - 3 comments

#486 - WIP: tracking the 19.05 development cycle

Pull Request - State: closed - Opened by bgruening almost 6 years ago - 8 comments

#486 - WIP: tracking the 19.05 development cycle

Pull Request - State: closed - Opened by bgruening almost 6 years ago - 8 comments

#485 - 19.01 release shed_tools broken link

Issue - State: closed - Opened by innovate-invent almost 6 years ago - 17 comments

#485 - 19.01 release shed_tools broken link

Issue - State: closed - Opened by innovate-invent almost 6 years ago - 17 comments

#477 - Linkage issue with tool_deps

Issue - State: closed - Opened by innovate-invent about 6 years ago - 1 comment

#477 - Linkage issue with tool_deps

Issue - State: closed - Opened by innovate-invent about 6 years ago - 1 comment

#476 - Incorrect galaxy.yml location

Issue - State: closed - Opened by innovate-invent about 6 years ago - 13 comments

#476 - Incorrect galaxy.yml location

Issue - State: closed - Opened by innovate-invent about 6 years ago - 13 comments

#472 - bcftools install

Issue - State: closed - Opened by abretaud about 6 years ago - 2 comments

#472 - bcftools install

Issue - State: closed - Opened by abretaud about 6 years ago - 2 comments

#463 - Problems with SSL config

Issue - State: closed - Opened by CarlosHorro about 6 years ago - 4 comments

#463 - Problems with SSL config

Issue - State: closed - Opened by CarlosHorro about 6 years ago - 4 comments

#457 - Startup Exception

Issue - State: closed - Opened by hroest over 6 years ago - 2 comments