bfrgoncalves/innuendo_rest_api issues and pull requests

#163 - Bump mako from 1.0.4 to 1.2.2

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#162 - Bump python-ldap from 2.4.27 to 3.4.0

Pull Request - State: open - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#161 - Bump babel from 2.3.4 to 2.9.1

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#160 - Bump jinja2 from 2.8 to 2.11.3

Pull Request - State: open - Opened by dependabot[bot] almost 4 years ago
Labels: dependencies

#159 - Develop

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#158 - - bug fix

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#157 - - bug fix for project alert appearance

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#156 - + Add warning message when project contains strains that have been re…

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#155 - correct run pipeline message

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#154 - correct other project table

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#153 - correct bug from project tables

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#152 - Develop

Pull Request - State: open - Opened by anaSDCorreia over 5 years ago

#151 - Develop

Pull Request - State: closed - Opened by anaSDCorreia over 5 years ago

#150 - improve profiles to db file by making it general for more species.

Pull Request - State: closed - Opened by bfrgoncalves about 6 years ago

#149 - Improve new species addtion

Pull Request - State: closed - Opened by bfrgoncalves about 6 years ago

#148 - Remove Allegrograph database dependency

Issue - State: open - Opened by bfrgoncalves about 6 years ago
Labels: enhancement, future

#147 - fix get assembly

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#146 - Identifying strains submitted to PHYLOViZ Online.

Issue - State: open - Opened by jacarrico over 6 years ago

#145 - Change pass

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#144 - Changing password to platform

Issue - State: closed - Opened by jhalkilahti over 6 years ago - 1 comment

#143 - Desrciption

Issue - State: open - Opened by jhalkilahti over 6 years ago

#142 - Prev v1

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#141 - Sample metadata showing differences

Issue - State: closed - Opened by jhalkilahti over 6 years ago - 1 comment

#140 - Owner not enforced

Issue - State: closed - Opened by jhalkilahti over 6 years ago - 2 comments

#139 - Flowcraft reports

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#138 - Add recipe submission routine

Issue - State: open - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: future, v1.1

#137 - Add recipe builder

Issue - State: open - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: future, v1.1

#136 - Flowcraft reports

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#135 - Flowcraft reports

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#134 - Add a Codacy badge to README.md

Pull Request - State: closed - Opened by codacy-badger over 6 years ago

#133 - Flowcraft reports

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#132 - Flowcraft reports

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#131 - Add versioning on workflows

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: v1-0

#130 - Add option to send message to all users

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: v1-0

#129 - closer to v1

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#128 - Add option to show workflow only to admin

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: v1-0

#127 - Add antigen prediction on SISTR process

Issue - State: closed - Opened by bfrgoncalves over 6 years ago
Labels: v1-0

#126 - Add admin platform lock

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: v1-0

#125 - Add option to select image on protocol creation

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 3 comments
Labels: v1-0

#124 - Add database information in the reports

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 2 comments
Labels: v1-0

#123 - Permission denied when deleting fastq

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 1 comment
Labels: bug, v1-0

#122 - Frozen modal when adding strain

Issue - State: closed - Opened by bfrgoncalves over 6 years ago - 1 comment

#121 - Es6 version

Pull Request - State: closed - Opened by bfrgoncalves over 6 years ago

#120 - Selection ->Download assembly issue

Issue - State: closed - Opened by jhalkilahti over 6 years ago - 2 comments

#119 - Es6 version

Pull Request - State: closed - Opened by bfrgoncalves almost 7 years ago

#118 - Es6 version

Pull Request - State: closed - Opened by bfrgoncalves almost 7 years ago

#117 - Quality control summary not showing properly

Issue - State: closed - Opened by jhalkilahti almost 7 years ago - 1 comment

#116 - Add resource to get available cg and wgMLST

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#115 - Data on demand on reports

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment
Labels: enhancement, invalid

#114 - Abricate annotation window header

Issue - State: closed - Opened by jhalkilahti almost 7 years ago - 2 comments

#113 - Option to delete fastq within a project

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#112 - Add cluster type and lineage classification

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#111 - Es6 version, nextflow, and reports-nf compatibility

Pull Request - State: closed - Opened by bfrgoncalves almost 7 years ago

#110 - Platform showing wrong number of samples

Issue - State: closed - Opened by jhalkilahti almost 7 years ago - 2 comments
Labels: bug, v1-0

#109 - Add option to share data between platform instances

Issue - State: open - Opened by bfrgoncalves almost 7 years ago
Labels: enhancement

#108 - Add notifications

Issue - State: open - Opened by bfrgoncalves almost 7 years ago
Labels: enhancement

#107 - Add standardised email communications

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 3 comments
Labels: v1-0

#106 - Add option to travel between a single project and its reports

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#105 - Change title of Modal alert depending on the message

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago

#104 - Add a new project table column with submission date

Issue - State: closed - Opened by ODiogoSilva almost 7 years ago - 1 comment

#103 - Add option to show mlst on PHYLOViZ Online

Issue - State: open - Opened by bfrgoncalves almost 7 years ago
Labels: enhancement

#102 - Deal with empty spaces on PHYLOViZ Online submit

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#101 - Normalize date format

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#100 - Strain stays in the report after removed from the project.

Issue - State: closed - Opened by bfrgoncalves almost 7 years ago - 1 comment

#99 - Get report log only showing after enter the project again

Issue - State: closed - Opened by bfrgoncalves about 7 years ago - 1 comment
Labels: bug, v1-0

#98 - Submitter field enabled on fresh Project

Issue - State: closed - Opened by bfrgoncalves about 7 years ago - 1 comment

#97 - Metadata override when submitting strains with same name

Issue - State: closed - Opened by bfrgoncalves about 7 years ago - 1 comment

#96 - One sort button disappears

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#95 - Data loss sparkline drop down menu

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#94 - Quota visualization

Issue - State: closed - Opened by bfrgoncalves about 7 years ago - 1 comment
Labels: enhancement

#93 - Lock Project Option

Issue - State: closed - Opened by bfrgoncalves about 7 years ago - 2 comments
Labels: enhancement

#92 - Human readable chewBBACA labels

Issue - State: closed - Opened by jacarrico about 7 years ago - 1 comment

#91 - Select all passed to send to PHYLOViZ

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 2 comments
Labels: enhancement, todo

#90 - Colors and nodes detaching from eachother in PHYLOViZ

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#89 - Data loss sparkline oddity

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#88 - Food-Bug number

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#87 - PHYLOViZ online metadata update issue

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#86 - Forcing R1 and R2 fastq files

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#85 - MLST results in reports (visual bug)

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#84 - FastQC not drawing graphs

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#83 - Reports front page issues (three for the price of one)

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 3 comments

#82 - MLST results are missing

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#81 - Total runtime: NaN minutes

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#80 - Possible pathotypes from Pathotyping module

Issue - State: closed - Opened by jhalkilahti about 7 years ago - 1 comment

#79 - Submitter and Owner columns (enhancement)

Issue - State: open - Opened by jhalkilahti about 7 years ago
Labels: enhancement

GitHub / bfrgoncalves/innuendo_rest_api issues and pull requests