Ecosyste.ms: Issues

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GitHub / benedictpaten/jobtree issues and pull requests

#42 - Add Slurm support

Pull Request - State: open - Opened by aaronk about 9 years ago

#41 - Grid engine support for terabyte (T) MEMTOT output from qhost, and cpu specifications

Pull Request - State: open - Opened by cooketho over 9 years ago - 1 comment

#40 - make test error

Issue - State: open - Opened by cooketho over 9 years ago

#39 - Rename to toil

Pull Request - State: closed - Opened by cket over 9 years ago

#38 - Dag rebased

Pull Request - State: closed - Opened by hannes-ucsc over 9 years ago - 1 comment

#37 - Development+mesos

Pull Request - State: closed - Opened by benedictpaten almost 10 years ago

#36 - Pluggable job store

Pull Request - State: closed - Opened by benedictpaten almost 10 years ago

#35 - Improved attribute checking in targets

Pull Request - State: closed - Opened by cket almost 10 years ago

#34 - job failures not correctly reducing retry count

Issue - State: open - Opened by benedictpaten almost 10 years ago

#33 - restarting jobTree the parameter changes have no effect

Issue - State: open - Opened by benedictpaten almost 10 years ago

#32 - Should make package pip installable

Issue - State: open - Opened by benedictpaten almost 10 years ago

#31 - Sonlib dependency is unnecessary

Issue - State: open - Opened by benedictpaten almost 10 years ago

#28 - periodically hangs entire parasol hub when listing jobs

Issue - State: open - Opened by joelarmstrong almost 10 years ago - 2 comments

#27 - Crash getting global temp dir when restarting jobtree

Issue - State: open - Opened by adamnovak about 10 years ago - 2 comments

#26 - entire jobTree crashes when a job's pickle file isn't written correctly

Issue - State: open - Opened by joelarmstrong about 10 years ago - 6 comments

#25 - Tmp dir location

Pull Request - State: closed - Opened by ifiddes about 10 years ago - 10 comments

#24 - don't want to pass parser here, it doesn't work

Pull Request - State: closed - Opened by ifiddes about 10 years ago - 4 comments

#22 - Please reconsider dependency on sonLib

Issue - State: closed - Opened by dentearl about 10 years ago - 1 comment

#21 - Change time format

Pull Request - State: closed - Opened by adamnovak over 10 years ago - 2 comments

#20 - Fixing crash when running with argparse

Pull Request - State: closed - Opened by adamnovak over 10 years ago

#19 - Job Tree does not re-build the stats.xml file frequently enough

Issue - State: closed - Opened by dentearl over 10 years ago - 2 comments

#17 - argparse functionality broken by 76a4328

Issue - State: closed - Opened by dentearl about 11 years ago - 5 comments

#16 - Not leaking file descriptors

Pull Request - State: closed - Opened by adamnovak over 11 years ago - 1 comment

#15 - Changing around IO redirection

Pull Request - State: closed - Opened by adamnovak over 11 years ago - 4 comments

#14 - Inheritable IO redirection, tighter CPU allocation, and a miscelanious test fix

Pull Request - State: closed - Opened by adamnovak over 11 years ago - 1 comment

#13 - setup.py for jobTree

Pull Request - State: closed - Opened by adamnovak over 11 years ago

#12 - LSF batch system for jobTree

Pull Request - State: closed - Opened by tk2 over 11 years ago

#11 - Deep thoughts (by Glenn)

Issue - State: closed - Opened by adamewing almost 12 years ago - 1 comment

#10 - Relative imports don't always work in jobTree

Issue - State: open - Opened by dentearl about 12 years ago - 1 comment

#9 - Eliminate STDERR output on non-error jobs.

Pull Request - State: open - Opened by kellrott about 12 years ago

#8 - When --batchSystem != singleMachine, --maxThreads should spark an error

Issue - State: closed - Opened by dentearl over 12 years ago - 2 comments

#7 - Stalling behavior with --maxThreads --maxJobs

Issue - State: closed - Opened by dentearl over 12 years ago - 1 comment

#6 - jobTree support for argparse

Issue - State: closed - Opened by dentearl over 12 years ago - 2 comments

#6 - jobTree support for argparse

Issue - State: closed - Opened by dentearl over 12 years ago - 2 comments

#5 - When do the tests end?

Issue - State: closed - Opened by dzerbino over 12 years ago - 3 comments

#4 - Eliminate the cryptic use of colors to hide status

Issue - State: closed - Opened by dentearl over 12 years ago - 3 comments

#3 - Updated grid engine

Pull Request - State: closed - Opened by dzerbino almost 13 years ago - 2 comments

#2 - errors in "make test"

Issue - State: closed - Opened by thirtyeggs over 13 years ago - 1 comment

#1 - Makes multijob independent of the paths set in .cshrc or .bashrc

Pull Request - State: closed - Opened by cvaske almost 14 years ago