Ecosyste.ms: Issues

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GitHub / bdgp/OpenHiCAMM issues and pull requests

#37 - Bump guava from 29.0-jre to 32.0.0-jre

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#36 - Bump hsqldb from 2.5.1 to 2.7.1

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#35 - Windows installation

Issue - State: closed - Opened by LauLauThom over 5 years ago - 1 comment

#33 - Add annotation workflow to the workflow report

Issue - State: closed - Opened by benwbooth over 8 years ago

#32 - set total task count for progress bar to all tasks on resume

Issue - State: closed - Opened by benwbooth over 8 years ago

#31 - add cartridge/slide position to acquisition folder name

Issue - State: closed - Opened by benwbooth over 8 years ago

#30 - allow custom workflow instance names

Issue - State: closed - Opened by benwbooth over 8 years ago

#28 - keep all log files

Issue - State: closed - Opened by benwbooth over 8 years ago

#27 - Change taskconfig.id to be an integer instead of string

Issue - State: closed - Opened by benwbooth over 8 years ago

#26 - optimize workflow graph dispatching

Issue - State: closed - Opened by benwbooth over 8 years ago

#25 - Fix the issue with the new camera not working after ~200 images

Issue - State: closed - Opened by benwbooth over 8 years ago - 1 comment

#24 - Improve the manual slide pool definition UI

Issue - State: open - Opened by benwbooth over 8 years ago - 1 comment

#23 - Don't log the long task status list

Issue - State: closed - Opened by benwbooth over 8 years ago

#22 - Parallelize the workflow report

Issue - State: closed - Opened by benwbooth over 8 years ago

#21 - Split out workflow report by slide

Issue - State: closed - Opened by benwbooth over 8 years ago

#19 - Automatically calculate pixel size on each run

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#18 - implement TI Generator module

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#17 - Implement Image Stitching module

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#16 - ROIFinder should be able to take a grid of images to capture large ROIs

Issue - State: closed - Opened by benwbooth over 9 years ago - 3 comments

#15 - Refactor the WorkflowDialog logic

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#12 - Remove the "Resume" button.

Issue - State: closed - Opened by benwbooth over 9 years ago - 2 comments

#11 - Fiji updater site for Micro-Manager

Issue - State: closed - Opened by benwbooth over 9 years ago

#9 - fix log file names

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#8 - Only count tasks in the current phase in the progress bar

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#7 - Only include modules and tasks in the current phase in the workflow/task graphs

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#6 - Show last important log message in the progress bar

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#5 - Make WorkflowRunnerDialog log window collapsible

Issue - State: open - Opened by benwbooth over 9 years ago

#4 - Automatically create first workflow instance for new workflows

Issue - State: closed - Opened by benwbooth over 9 years ago

#3 - Automatic cartridge scanning to create Pool/PoolSlide/Slide records

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#2 - Detect stage-moving failures in the slide loader module

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment

#1 - Don't automatically create task folders for every task.

Issue - State: closed - Opened by benwbooth over 9 years ago - 1 comment