Ecosyste.ms: Issues

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GitHub / bcm-uga/Loter issues and pull requests

#27 - "np.float" and "np.int" were no longer supported after NumPy 1.20

Issue - State: closed - Opened by TanXinjiang over 1 year ago - 2 comments

#26 - Outgroup sites affect Loter result

Issue - State: open - Opened by zhangzhiyangcs over 1 year ago

#25 - Splitting Vcf per chr & Optimal Parameter for Phase Correction

Issue - State: closed - Opened by casia16 over 2 years ago - 1 comment

#24 - Encoding of ancestral populations in the output file

Issue - State: open - Opened by xiaoxiaoerbao over 2 years ago

#23 - Plotting of output

Issue - State: closed - Opened by DEYANGEIOZ almost 3 years ago - 1 comment

#22 - Use of Loter in haploid organisms

Issue - State: closed - Opened by pabloangulo7 almost 3 years ago - 2 comments
Labels: help wanted

#21 - Question about bagging

Issue - State: closed - Opened by silvewheat over 3 years ago - 2 comments

#20 - fix linear_assignment_ error or warning

Pull Request - State: closed - Opened by bguo068 almost 4 years ago - 1 comment

#19 - Error while import loter.locanc.local_ancestry as lc

Issue - State: closed - Opened by paulocecco almost 4 years ago - 2 comments
Labels: bug

#18 - How can I reduce the Memory usage of Loter?

Issue - State: closed - Opened by silvewheat about 4 years ago - 5 comments

#17 - How to get the introgressed segment

Issue - State: closed - Opened by silvewheat about 4 years ago - 2 comments

#16 - ModuleNotFoundError

Issue - State: closed - Opened by liufy11 over 4 years ago

#15 - Missing scikit-learn module

Issue - State: closed - Opened by gdurif over 4 years ago - 1 comment

#14 - no reference in test data

Issue - State: closed - Opened by liufy11 over 4 years ago - 1 comment

#13 - [Install Error] cannot find -lblas

Issue - State: closed - Opened by silvewheat over 4 years ago - 2 comments

#12 - error Library _loter_wrap.so not found

Issue - State: closed - Opened by paulocecco over 4 years ago - 1 comment
Labels: wontfix

#11 - RuntimeError: Python version >= 3.5 required.

Issue - State: closed - Opened by paulocecco over 4 years ago

#10 - OSError:

Issue - State: closed - Opened by mano1988 about 5 years ago - 12 comments

#9 - Bias in the output and very different results when using python module vs loter_cli

Issue - State: closed - Opened by hudja over 5 years ago - 10 comments

#8 - help for chloroplast genomes

Issue - State: closed - Opened by Mirror361025 over 5 years ago - 4 comments

#7 - multiple sources

Issue - State: closed - Opened by angelesdecara over 5 years ago - 5 comments

#5 - Error in loter_smooth

Issue - State: closed - Opened by meddly almost 6 years ago - 2 comments

#4 - Unsinstall package

Issue - State: closed - Opened by meddly almost 6 years ago - 1 comment

#3 - error Library _loter_wrap.so not found

Issue - State: closed - Opened by ronaldrobles about 6 years ago - 6 comments

#2 - Output haplotype order

Issue - State: closed - Opened by gaushi over 6 years ago - 6 comments

#1 - Local ancestry multiple processors.

Issue - State: closed - Opened by francescomontinaro over 6 years ago - 2 comments