Ecosyste.ms: Issues

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GitHub / bcgsc/transabyss issues and pull requests

#32 - dirname: missing operand

Issue - State: closed - Opened by ksc289 12 months ago

#31 - ERROR: CMD ended with status code 1

Issue - State: open - Opened by vini8cs about 1 year ago - 4 comments
Labels: question

#30 - change python-igraph to igraph

Pull Request - State: closed - Opened by szhorvat over 1 year ago - 1 comment

#29 - Fixed depricated operator

Pull Request - State: closed - Opened by asan-emirsaleh over 1 year ago - 1 comment

#28 - Errorneusly posted

Issue - State: closed - Opened by asan-emirsaleh over 1 year ago

#27 - ERROR: CMD ended with status code 2

Issue - State: closed - Opened by Liyong-Zhang almost 2 years ago - 3 comments
Labels: question

#26 - Question: no abyss-pe.Makefile in ( .../miniconda3/bin)

Issue - State: closed - Opened by charleshauser over 2 years ago - 6 comments
Labels: question

#25 - Trimming of polyA tails

Issue - State: closed - Opened by ms-gx over 3 years ago - 2 comments
Labels: question

#24 - Assembly strategy for large datasets

Issue - State: open - Opened by mtmcgowan almost 4 years ago - 5 comments
Labels: question

#23 - Assembly stopped with error status code 2

Issue - State: closed - Opened by mhfk almost 4 years ago - 5 comments

#22 - Trans-ABySS not compatible with icu=67.1 on bioconda, downgrade to 58.* to use

Issue - State: closed - Opened by selveyad over 4 years ago - 2 comments

#21 - ABYSS-P called instead abyss-pe

Issue - State: closed - Opened by weedcentipede about 5 years ago - 5 comments
Labels: question

#20 - ERROR: CMD ended with status code 2

Issue - State: closed - Opened by weedcentipede about 5 years ago - 2 comments

#20 - ERROR: CMD ended with status code 2

Issue - State: closed - Opened by weedcentipede about 5 years ago - 2 comments

#19 - Can't get the sample dataset to work

Issue - State: closed - Opened by alissawilliams over 5 years ago - 14 comments
Labels: question

#18 - disable running mpi

Issue - State: closed - Opened by lsterck over 5 years ago - 14 comments
Labels: question

#17 - Transabyss default param setting issue

Issue - State: closed - Opened by lsterck over 5 years ago - 4 comments
Labels: question

#16 - awk files not found

Issue - State: closed - Opened by 54mu over 5 years ago - 2 comments

#15 - Correct specification of paired-end reads

Issue - State: closed - Opened by winni2k almost 6 years ago - 5 comments
Labels: question

#14 - Update conda version

Issue - State: closed - Opened by kokyriakidis almost 6 years ago - 4 comments

#13 - Library conflict

Issue - State: closed - Opened by weedcentipede about 6 years ago - 3 comments

#12 - Conda problems, instalation

Issue - State: closed - Opened by weedcentipede about 6 years ago - 4 comments

#11 - Memory problem?

Issue - State: open - Opened by kokyriakidis about 6 years ago - 19 comments
Labels: question

#10 - python3 support?

Issue - State: closed - Opened by winni2k almost 7 years ago - 4 comments
Labels: enhancement

#9 - ABySS 2.0.2

Issue - State: closed - Opened by mspiffy almost 7 years ago - 2 comments
Labels: enhancement

#8 - installation with conda

Issue - State: closed - Opened by webbchen over 7 years ago - 4 comments

#7 - make fail for abyss1.5.2/1.5.1

Issue - State: closed - Opened by cd-ccmb over 7 years ago - 8 comments

#6 - sample-data fails

Issue - State: closed - Opened by vishnubob over 8 years ago - 3 comments

#5 - How to use trans-abyss to deal with FR reads?

Issue - State: closed - Opened by zhaoletian over 8 years ago - 6 comments

#4 - TranAbyss-Analyze Paired-end Accession Error

Issue - State: closed - Opened by gs1070 over 9 years ago - 6 comments

#3 - [1.5.2] fails with blat 35

Issue - State: closed - Opened by wookietreiber almost 10 years ago - 6 comments

#2 - bin/*.awk: Set interpreter to /usr/bin/awk

Pull Request - State: closed - Opened by sjackman about 10 years ago - 1 comment
Labels: enhancement

#1 - BLAT requires glibc 2.7+

Issue - State: closed - Opened by ghost over 10 years ago - 2 comments