Ecosyste.ms: Issues

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GitHub / bcgsc/longstitch issues and pull requests

#22 - Add pytests to CI

Pull Request - State: closed - Opened by lcoombe about 3 years ago

#22 - Add pytests to CI

Pull Request - State: closed - Opened by lcoombe about 3 years ago

#21 - Rerunning pipeline with Arks

Issue - State: closed - Opened by charlesfeigin about 3 years ago - 2 comments
Labels: question

#21 - Rerunning pipeline with Arks

Issue - State: closed - Opened by charlesfeigin about 3 years ago - 2 comments
Labels: question

#20 - Add more tips for running LongStitch to README

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#20 - Add more tips for running LongStitch to README

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#19 - Make error on longstitch run

Issue - State: closed - Opened by Mondlii over 3 years ago - 5 comments

#19 - Make error on longstitch run

Issue - State: closed - Opened by Mondlii over 3 years ago - 5 comments

#18 - Conda install for longstitch

Issue - State: closed - Opened by Mondlii over 3 years ago - 15 comments

#18 - Conda install for longstitch

Issue - State: closed - Opened by Mondlii over 3 years ago - 15 comments

#17 - longstitch output format -- scaffolds?

Issue - State: closed - Opened by RaverJay over 3 years ago - 3 comments

#17 - longstitch output format -- scaffolds?

Issue - State: closed - Opened by RaverJay over 3 years ago - 3 comments

#16 - Longstitch crashes immediately

Issue - State: closed - Opened by charlesfeigin over 3 years ago - 12 comments

#16 - Longstitch crashes immediately

Issue - State: closed - Opened by charlesfeigin over 3 years ago - 12 comments

#15 - Prepare for release v1.0.1

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#15 - Prepare for release v1.0.1

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#14 - Add demo for LongStitch

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#14 - Add demo for LongStitch

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#13 - make: command: Command not found

Issue - State: closed - Opened by Dikaryotic over 3 years ago - 6 comments
Labels: question

#13 - make: command: Command not found

Issue - State: closed - Opened by Dikaryotic over 3 years ago - 6 comments
Labels: question

#12 - v1.0.0

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#12 - v1.0.0

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#11 - Add version info to longstitch makefile

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#11 - Add version info to longstitch makefile

Pull Request - State: closed - Opened by lcoombe over 3 years ago - 1 comment

#10 - Stream reads change

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#10 - Stream reads change

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#9 - Output barcode multiplicity in long-to-linked-pe.cpp

Pull Request - State: closed - Opened by jwcodee over 3 years ago

#9 - Output barcode multiplicity in long-to-linked-pe.cpp

Pull Request - State: closed - Opened by jwcodee over 3 years ago

#8 - Add m parameter for tigmint and use correct number of threads

Pull Request - State: closed - Opened by jwcodee over 3 years ago

#8 - Add m parameter for tigmint and use correct number of threads

Pull Request - State: closed - Opened by jwcodee over 3 years ago

#7 - Long to linked update

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#7 - Long to linked update

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#6 - long-to-linked-pe c++ port

Pull Request - State: closed - Opened by jwcodee over 3 years ago - 1 comment

#6 - long-to-linked-pe c++ port

Pull Request - State: closed - Opened by jwcodee over 3 years ago - 1 comment

#5 - Add QUAST target for default longstitch run

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#5 - Add QUAST target for default longstitch run

Pull Request - State: closed - Opened by lcoombe over 3 years ago

#4 - Longstitch makefile documentation updates, fixes

Pull Request - State: closed - Opened by lcoombe almost 4 years ago

#4 - Longstitch makefile documentation updates, fixes

Pull Request - State: closed - Opened by lcoombe almost 4 years ago

#3 - Add arks-long to pipeline

Pull Request - State: closed - Opened by theottlo almost 4 years ago

#2 - Update to LongStitch pipeline makefile, README, add license

Pull Request - State: closed - Opened by lcoombe about 4 years ago - 2 comments

#2 - Update to LongStitch pipeline makefile, README, add license

Pull Request - State: closed - Opened by lcoombe about 4 years ago - 2 comments

#1 - Bug fixes and tigmint-long additions

Pull Request - State: closed - Opened by janetxinli about 4 years ago

#1 - Bug fixes and tigmint-long additions

Pull Request - State: closed - Opened by janetxinli about 4 years ago