Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / bbfrederick/rapidtide issues and pull requests

#158 - Bump requests from 2.31.0 to 2.32.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#157 - Bump actions/checkout from 4.1.5 to 4.1.6

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, github_actions

#156 - Not able to generate desc-shiftedtcs_bold NIFTI using documentation instructions

Issue - State: closed - Opened by nnmenon 5 months ago - 3 comments
Labels: bug

#155 - Bump actions/checkout from 4.1.4 to 4.1.5

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, github_actions

#154 - Bump jinja2 from 3.1.3 to 3.1.4 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#153 - Bump tqdm from 4.66.1 to 4.66.3 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, python

#152 - RuntimeError: Undefined plan with threads. This is a bug

Issue - State: closed - Opened by dangom 5 months ago - 1 comment
Labels: bug

#151 - Sync dev to main

Pull Request - State: closed - Opened by bbfrederick 5 months ago

#150 - Bump actions/checkout from 4.1.3 to 4.1.4

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies, github_actions

#149 - Bump actions/checkout from 4.1.2 to 4.1.3

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, github_actions

#148 - Bump idna from 3.4 to 3.7 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies, python

#147 - Clarification about using freesurfer-produced segmentations in denoising

Issue - State: closed - Opened by themeo 6 months ago - 2 comments
Labels: bug

#146 - Bump pillow from 10.2.0 to 10.3.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago - 1 comment
Labels: dependencies, python

#145 - Bump black from 23.7.0 to 24.3.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, python

#144 - Bump actions/checkout from 4.1.1 to 4.1.2

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, github_actions

#143 - Bump gittools/actions from 0 to 1

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies, github_actions

#142 - Dev

Pull Request - State: closed - Opened by bbfrederick 8 months ago - 1 comment

#140 - Bump pillow from 10.0.1 to 10.2.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago - 1 comment
Labels: dependencies, python

#139 - Bump jinja2 from 3.1.2 to 3.1.3 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies, python

#138 - Bump fonttools from 4.42.0 to 4.43.0 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies, python

#137 - Bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies, github_actions

#136 - Bump fredericklab/basecontainer from 0.2.7 to v0.2.8

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies, docker

#135 - Bidsonly

Pull Request - State: closed - Opened by bbfrederick 11 months ago

#134 - Bump actions/checkout from 4.1.0 to 4.1.1

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 1 comment
Labels: dependencies, github_actions

#133 - Bump urllib3 from 2.0.6 to 2.0.7 in /docs

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 1 comment
Labels: dependencies, python

#132 - Bump codacy/git-version from 2.7.1 to 2.8.0

Pull Request - State: closed - Opened by dependabot[bot] almost 1 year ago - 1 comment
Labels: dependencies, github_actions

#131 - Bump pillow from 10.0.0 to 10.0.1 in /docs

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, python

#130 - Bump urllib3 from 2.0.4 to 2.0.6 in /docs

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, python

#129 - Bump actions/checkout from 4.0.0 to 4.1.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#128 - numpy.float deprecated, this is now changed in io.py

Pull Request - State: closed - Opened by dittothat about 1 year ago - 2 comments

#127 - Bump docker/setup-qemu-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#126 - Bump docker/setup-buildx-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#125 - Bump docker/build-push-action from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#124 - Bump docker/login-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#123 - Bump docker/metadata-action from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#122 - Latest version in docker does not run

Issue - State: closed - Opened by dittothat about 1 year ago - 3 comments
Labels: bug

#121 - Updated rapidtide2std to new map names

Pull Request - State: closed - Opened by bbfrederick about 1 year ago

#120 - Bump actions/checkout from 3.6.0 to 4.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, github_actions

#119 - Dockermods

Pull Request - State: closed - Opened by bbfrederick about 1 year ago

#118 - Bump actions/checkout from 3.5.3 to 3.6.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, github_actions

#117 - Brain mask too aggressively eroded?

Issue - State: closed - Opened by themeo about 1 year ago - 2 comments
Labels: bug

#116 - rapidtide stops without error messages

Issue - State: closed - Opened by Ludoalevesque about 1 year ago - 13 comments
Labels: bug

#115 - --acfix in rapidtide does not work

Issue - State: closed - Opened by themeo about 1 year ago - 7 comments
Labels: bug

#114 - --nofitfilt without effect

Issue - State: closed - Opened by poeplau about 1 year ago - 1 comment
Labels: bug

#113 - rapidtide hangs

Issue - State: closed - Opened by themeo about 1 year ago - 3 comments
Labels: bug

#112 - aligntcs.py index issue

Issue - State: closed - Opened by benalibayram over 1 year ago - 2 comments

#111 - Bump fredericklab/basecontainer from v0.1.8 to v0.1.9

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, docker

#110 - Bump actions/checkout from 3.5.2 to 3.5.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, github_actions

#109 - Bump actions/checkout from 3.5.1 to 3.5.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, github_actions

#108 - Bump actions/checkout from 3.5.0 to 3.5.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, github_actions

#107 - More PNC

Issue - State: open - Opened by poeplau over 1 year ago - 4 comments

#106 - Physiological Noise Correction

Issue - State: closed - Opened by poeplau over 1 year ago - 4 comments

#105 - RIPTiDe fundamentals

Issue - State: closed - Opened by poeplau over 1 year ago - 4 comments

#104 - switch to aws mountpoint at some point

Issue - State: closed - Opened by dmd over 1 year ago - 2 comments

#103 - Bump actions/checkout from 3.3.0 to 3.5.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, github_actions

#102 - Bump actions/checkout from 3.3.0 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, github_actions

#101 - Spatialtolerance

Pull Request - State: closed - Opened by bbfrederick over 1 year ago

#100 - Bump docker/build-push-action from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, github_actions

#99 - Bump actions/checkout from 3.1.0 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, github_actions

#98 - Bump actions/checkout from 3.1.0 to 3.2.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies, github_actions

#97 - clean up docker build cruft

Issue - State: closed - Opened by dmd almost 2 years ago

#96 - --version does not work inside Docker

Issue - State: closed - Opened by dmd almost 2 years ago - 1 comment
Labels: bug

#95 - warning about urllib or something

Issue - State: closed - Opened by dmd almost 2 years ago - 2 comments
Labels: bug

#94 - running rapidtide with no arguments gives usage string twice

Issue - State: closed - Opened by dmd almost 2 years ago
Labels: bug

#93 - If docker container is run with no arguments, cloud mode error is given.

Issue - State: closed - Opened by dmd almost 2 years ago - 1 comment

#92 - --version command doesn't work

Issue - State: closed - Opened by dmd almost 2 years ago - 1 comment
Labels: bug

#91 - When running, report the current version number.

Issue - State: closed - Opened by dmd almost 2 years ago - 3 comments
Labels: enhancement

#89 - use skopeo in a GHA to copy to ECR

Issue - State: closed - Opened by dmd almost 2 years ago - 1 comment
Labels: enhancement

#88 - Bump docker/build-push-action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies, github_actions

#87 - Bump actions/checkout from 2 to 3.1.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#86 - Bump docker/setup-buildx-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#85 - Bump docker/setup-qemu-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#84 - Bump docker/login-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#83 - Bump actions/setup-python from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#82 - support multiarchitecture - arm/graviton

Issue - State: closed - Opened by dmd about 2 years ago - 1 comment
Labels: enhancement

#81 - spelling

Pull Request - State: closed - Opened by dmd about 2 years ago

#80 - replace progressbar with tqdm

Issue - State: closed - Opened by dmd about 2 years ago - 1 comment

#79 - pyfftw nthreads error

Issue - State: closed - Opened by robbwh over 2 years ago - 3 comments
Labels: bug

#78 - --norefinedespeckled timeshift applied to negative number of voxels

Issue - State: closed - Opened by robbwh over 2 years ago - 4 comments
Labels: bug

#77 - despeckle_thresh logic

Issue - State: closed - Opened by robbwh over 2 years ago - 3 comments
Labels: bug

#76 - Matplotlib runtime from docker image run

Issue - State: closed - Opened by chienc1 about 3 years ago - 3 comments
Labels: bug

#75 - [INFRA] Adjust DockerHub publication workflow

Pull Request - State: closed - Opened by tsalo about 3 years ago - 1 comment

#74 - Publish Docker image automatically on release with GitHub Actions

Issue - State: closed - Opened by tsalo about 3 years ago - 1 comment
Labels: enhancement

#73 - Maxcorr map voxel =1 bug?

Issue - State: closed - Opened by robbwh about 3 years ago - 13 comments
Labels: bug

#72 - [FIX, DOC] Consolidate and correct dependencies for RTD build and CI

Pull Request - State: closed - Opened by tsalo about 3 years ago - 14 comments

#71 - spelling corrections

Pull Request - State: closed - Opened by dmd over 3 years ago

#70 - Dev

Pull Request - State: closed - Opened by bbfrederick over 3 years ago

#69 - "rapidtide2 is a rapidtide script, but is not installed" after Docker installation

Issue - State: closed - Opened by cauzzo-s5 over 3 years ago - 7 comments
Labels: bug

#68 - [REF] Continue shifting to logging

Pull Request - State: closed - Opened by tsalo over 3 years ago - 4 comments

#67 - -d/dt fMRI signal for BOLD-CSF inflow coupling analysis

Issue - State: closed - Opened by robbwh over 3 years ago - 6 comments
Labels: enhancement

#66 - [REF] Fix logger call and reformat general logger

Pull Request - State: closed - Opened by tsalo over 3 years ago - 4 comments

#65 - [REF] Use logging instead of printed statements

Pull Request - State: closed - Opened by tsalo over 3 years ago - 5 comments

#64 - [STY] Address style issues in correlate.py

Pull Request - State: closed - Opened by tsalo over 3 years ago - 4 comments

#63 - master branch renamed to main

Issue - State: closed - Opened by bbfrederick over 3 years ago
Labels: enhancement

#62 - Python Install line error

Issue - State: closed - Opened by jmatthews-rotman over 3 years ago - 5 comments
Labels: bug

#61 - [MAINT] Do not bundle unnecessary data in build

Pull Request - State: closed - Opened by tsalo over 3 years ago

#60 - [INFRA] Add GitHub Action for deployment to PyPi

Pull Request - State: closed - Opened by tsalo over 3 years ago - 3 comments

#59 - Issue finishing happy using external cardiacfile in happy V2.0alpha12

Issue - State: closed - Opened by NigelCol over 3 years ago - 7 comments
Labels: bug