Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / bayer-science-for-a-better-life/tiffslide issues and pull requests
#71 - Cannot parse metadata of tiled-tiff images.
Issue -
State: closed - Opened by njlucare almost 2 years ago
- 4 comments
#70 - Support for Hamamatsu VMS
Issue -
State: open - Opened by sarthakpati almost 2 years ago
Labels: compatibility
#69 - Refactor leica metadata parsing
Issue -
State: open - Opened by ap-- almost 2 years ago
Labels: compatibility
#68 - Draft: Parse bounding box from image offset and size
Pull Request -
State: closed - Opened by erikogabrielsson almost 2 years ago
- 1 comment
#67 - tiffslide.repair: provide workarounds for non-ascii desc
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#66 - Typing anystr
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#65 - tiffslide fails to detect svs format and MPP if ImageDescription contains non ascii characters
Issue -
State: closed - Opened by 464hee almost 2 years ago
- 11 comments
Labels: bug 🐛, compatibility
#64 - repo: some more standardized layout
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#63 - round downsamples ?!?
Issue -
State: open - Opened by ap-- almost 2 years ago
Labels: help wanted, investigate 🕵️
#62 - Uniform axis scaling on intermediate lvl
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#61 - tiffslide: fix missed downsample changes
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#60 - ci: test on python 3.11
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#59 - setup.cfg: version limit fsspec
Pull Request -
State: closed - Opened by ap-- almost 2 years ago
#58 - Offer direct-to-gpu decode
Issue -
State: open - Opened by ap-- about 2 years ago
- 1 comment
Labels: enhancement
#57 - tiffslide with CLAM
Issue -
State: closed - Opened by mpapadomanolaki about 2 years ago
- 5 comments
Labels: bug 🐛, awaiting reply 📩
#56 - correct downsample
Pull Request -
State: closed - Opened by ap-- about 2 years ago
#55 - tiffslide: prevent deprecation warning for non rgb
Pull Request -
State: closed - Opened by ap-- about 2 years ago
#54 - Add MIRAX fixture
Pull Request -
State: closed - Opened by GuillaumeDesforges about 2 years ago
- 3 comments
#53 - tiffslide: fixed repr when backed by reference fs
Pull Request -
State: closed - Opened by ap-- about 2 years ago
#52 - test_from_kerchunk fails in CI but passes locally?
Issue -
State: closed - Opened by ap-- about 2 years ago
- 2 comments
Labels: bug 🐛, help wanted
#51 - Compatibility issue with read_region
Issue -
State: closed - Opened by nickwww about 2 years ago
- 5 comments
Labels: compatibility
#50 - Fix downsample
Pull Request -
State: closed - Opened by ap-- over 2 years ago
#49 - Issue with `get_best_level_for_downsample` for NDPI
Issue -
State: closed - Opened by stergioc over 2 years ago
- 2 comments
Labels: bug 🐛
#48 - Adds hamamatsu tags on slide properties for .ndpi
Pull Request -
State: closed - Opened by stergioc over 2 years ago
- 2 comments
#47 - support for axes=='YX' and uint16 svs file.
Pull Request -
State: closed - Opened by One-sixth over 2 years ago
- 3 comments
#46 - Support for axes=='YX' and uint16 svs files.
Issue -
State: closed - Opened by One-sixth over 2 years ago
- 5 comments
#45 - fast tissue iteration
Pull Request -
State: closed - Opened by ap-- over 2 years ago
- 1 comment
#44 - Support Mirax images
Pull Request -
State: open - Opened by ap-- over 2 years ago
- 9 comments
#43 - tiffslide: remove setup.py
Pull Request -
State: closed - Opened by ap-- over 2 years ago
#42 - CI: cache downloads
Issue -
State: closed - Opened by ap-- over 2 years ago
#41 - Py37 compat
Pull Request -
State: closed - Opened by ap-- over 2 years ago
#40 - Support Ventana images
Pull Request -
State: open - Opened by ap-- over 2 years ago
Labels: compatibility
#39 - Padding should compare with level_hw, not base_hw.
Pull Request -
State: closed - Opened by One-sixth over 2 years ago
#38 - [Bug] Padding is expected. But it is not padding.
Issue -
State: closed - Opened by One-sixth over 2 years ago
- 1 comment
#37 - Ventana BIF overlap not considered
Issue -
State: open - Opened by ap-- over 2 years ago
Labels: help wanted, compatibility
#36 - Leica SCN multiple series not composited into one level
Issue -
State: closed - Opened by ap-- over 2 years ago
- 1 comment
Labels: compatibility
#35 - Hamamatsu NDPI missing some levels
Issue -
State: open - Opened by ap-- over 2 years ago
- 1 comment
Labels: compatibility
#34 - Openseadragon very slow with svs
Issue -
State: closed - Opened by nwey over 2 years ago
- 4 comments
Labels: awaiting reply 📩
#33 - Support for Mirax
Issue -
State: open - Opened by ap-- over 2 years ago
Labels: enhancement, help wanted, compatibility
#32 - Support for DICOM
Issue -
State: open - Opened by sarthakpati over 2 years ago
- 2 comments
Labels: enhancement, help wanted
#31 - Looking forward AWS S3 and google cloud storage implementations
Issue -
State: closed - Opened by huangzhii over 2 years ago
- 1 comment
#30 - Add supported formats table to README
Issue -
State: closed - Opened by ap-- almost 3 years ago
- 1 comment
Labels: documentation
#29 - overflow encountered in long_scalars ry0 = (base_y * level_h) // base_h
Issue -
State: closed - Opened by One-sixth almost 3 years ago
- 7 comments
#28 - Make out-of-bounds pad behavior consistent with openslide.
Pull Request -
State: closed - Opened by One-sixth almost 3 years ago
- 1 comment
#27 - Allowing tile to extend beyond image region by padding.
Issue -
State: closed - Opened by BenjaminIsaac0111 almost 3 years ago
- 7 comments
Labels: help wanted, compatibility
#26 - ValueError when loading region from Aperio .svs
Issue -
State: closed - Opened by BenjaminIsaac0111 almost 3 years ago
- 2 comments
#25 - Breaks when running close() after accessing the zarr group
Issue -
State: closed - Opened by sdvillal almost 3 years ago
- 10 comments
#24 - Some scn test slide errors: Cannot handle data type
Issue -
State: closed - Opened by ap-- almost 3 years ago
- 1 comment
Labels: bug 🐛
#23 - Allow manually overriding which series to use in TiffSlide
Issue -
State: open - Opened by ap-- almost 3 years ago
- 5 comments
Labels: enhancement
#22 - Use the correct Leica image series.
Pull Request -
State: closed - Opened by One-sixth almost 3 years ago
- 5 comments
#21 - Two series in a scn tiff image, but only first series are used.
Issue -
State: closed - Opened by One-sixth almost 3 years ago
- 2 comments
Labels: help wanted, compatibility
#19 - Unable to read PNG files
Issue -
State: closed - Opened by sarthakpati almost 3 years ago
- 8 comments
Labels: help wanted, compatibility
#18 - Tiffslide errors when used in pytorch dataloader with `num_workers>1`
Issue -
State: open - Opened by ap-- almost 3 years ago
- 4 comments
Labels: bug 🐛, workaround-exists
#17 - How to cite?
Issue -
State: closed - Opened by sarthakpati almost 3 years ago
- 3 comments
Labels: question
#16 - add stable version installation instructions
Pull Request -
State: closed - Opened by sarthakpati almost 3 years ago
- 2 comments
#15 - Add conda recipe
Issue -
State: closed - Opened by sarthakpati almost 3 years ago
- 5 comments
#14 - Tiffslide fails in multi-threaded mode
Issue -
State: closed - Opened by lukasii about 3 years ago
- 2 comments
#13 - black bar artifacts on zoomed edge tiles
Issue -
State: closed - Opened by ap-- about 3 years ago
Labels: bug 🐛
#12 - Stacklevel on import warning
Issue -
State: closed - Opened by ap-- over 3 years ago
#11 - ICC color profile - SVS aperio GT450
Issue -
State: open - Opened by delta2golf over 3 years ago
- 5 comments
Labels: enhancement, help wanted
#10 - anonymization options?
Issue -
State: open - Opened by delta2golf over 3 years ago
- 2 comments
Labels: enhancement
#9 - Too big for AWS Lambda layer
Issue -
State: open - Opened by rmontroy over 3 years ago
- 5 comments
Labels: help wanted, workaround-exists
#8 - support parsing tiff tags as openslide properties
Issue -
State: open - Opened by ap-- over 3 years ago
Labels: compatibility
#7 - benchmark tiffslide
Issue -
State: closed - Opened by ap-- over 3 years ago
- 1 comment
Labels: performance :snail:
#6 - need to work out the minimum version requirements
Issue -
State: closed - Opened by ap-- almost 4 years ago
- 1 comment
#5 - add ci/cd jobs
Issue -
State: closed - Opened by ap-- almost 4 years ago
#4 - static type checking
Issue -
State: closed - Opened by ap-- almost 4 years ago
- 1 comment
Labels: good first issue
#3 - Standalone documentation with sphinx
Issue -
State: open - Opened by ap-- almost 4 years ago
Labels: documentation
#2 - deploy to pypi
Issue -
State: closed - Opened by ap-- almost 4 years ago
- 1 comment
#1 - add comparison tests
Issue -
State: closed - Opened by ap-- almost 4 years ago
Labels: compatibility