Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / bartongroup/ProteoFAV issues and pull requests
#56 - PDBe REST api now (v1.8) provides uniprot_canonical flag
Issue -
State: open - Opened by tbrittoborges almost 6 years ago
Labels: enhancement
#55 - Downloader should accept a file object
Issue -
State: open - Opened by tbrittoborges over 6 years ago
Labels: enhancement
#54 - Check over Chimera module again.
Issue -
State: open - Opened by stuartmac over 6 years ago
#53 - Add biological question/answer narrative to example notebook
Issue -
State: open - Opened by stuartmac over 6 years ago
- 1 comment
#52 - Jalview workflow example
Issue -
State: open - Opened by stuartmac over 6 years ago
#51 - Adding VCF parsing/loading for using with gnomAD variants
Issue -
State: open - Opened by biomadeira over 6 years ago
Labels: enhancement
#50 - Development Branch
Pull Request -
State: closed - Opened by biomadeira over 6 years ago
#49 - Methods to work with multiple sequence alignments
Issue -
State: closed - Opened by biomadeira over 6 years ago
- 1 comment
Labels: enhancement
#48 - Methods to export to chimera command file?
Issue -
State: closed - Opened by biomadeira over 6 years ago
- 2 comments
Labels: enhancement
#47 - Methods to export Jalview Feature/Annotation files for a sequence or multiple sequences (MSA)?
Issue -
State: open - Opened by biomadeira over 6 years ago
Labels: enhancement
#46 - Development Branch
Pull Request -
State: closed - Opened by biomadeira over 6 years ago
#45 - Developing a more modular approach
Issue -
State: open - Opened by biomadeira almost 7 years ago
- 1 comment
Labels: enhancement
#44 - Improve column types checking
Issue -
State: closed - Opened by biomadeira almost 7 years ago
- 1 comment
Labels: enhancement
#43 - Added missing tests for config.py
Pull Request -
State: closed - Opened by biomadeira almost 7 years ago
- 1 comment
#42 - fix multiline string causing problems in the test.
Pull Request -
State: closed - Opened by tbrittoborges almost 7 years ago
#41 - Structures 5uyx/5uyz/4abo are not parsed correctly
Issue -
State: closed - Opened by biomadeira almost 7 years ago
- 1 comment
Labels: bug
#40 - Python 3 support
Issue -
State: closed - Opened by tbrittoborges almost 7 years ago
- 1 comment
Labels: enhancement
#39 - Feature: arguments and installation with Click
Pull Request -
State: closed - Opened by tbrittoborges almost 7 years ago
#38 - Feature chimera
Pull Request -
State: closed - Opened by tbrittoborges over 7 years ago
#37 - Fabio
Pull Request -
State: closed - Opened by biomadeira over 7 years ago
- 1 comment
#36 - Methods not used anywhere - what to do about them?
Issue -
State: closed - Opened by biomadeira over 7 years ago
- 1 comment
Labels: question
#35 - check_sequence='warn'
Issue -
State: open - Opened by tbrittoborges over 7 years ago
Labels: bug, enhancement
#34 - Merging updates made to master onto "fabio" branch
Pull Request -
State: closed - Opened by biomadeira over 7 years ago
#33 - Hierarchical Edge Bundling visualisation
Issue -
State: closed - Opened by tbrittoborges over 7 years ago
- 1 comment
Labels: enhancement
#32 - Add a visualisation function to plot number of variants on proteins
Issue -
State: open - Opened by tbrittoborges almost 8 years ago
Labels: enhancement
#31 - Merge table would be better represented as a Class
Issue -
State: closed - Opened by tbrittoborges about 8 years ago
- 1 comment
Labels: enhancement
#30 - Minor fixes
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
#29 - Improved the way in which the values are populated and updated, so th…
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
#28 - Small improvements so that we can reload the config defaults from a different file on the flight
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
#27 - Update merge tables to work with biounits
Issue -
State: closed - Opened by biomadeira about 8 years ago
- 2 comments
#26 - Test for merge tables with assembly units
Issue -
State: closed - Opened by tbrittoborges about 8 years ago
- 2 comments
#25 - Simplified the biological unit methods so that it downloads these fro…
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
- 1 comment
#24 - Test for merge_tables and all atoms
Issue -
State: closed - Opened by tbrittoborges about 8 years ago
- 1 comment
#23 - Improved the sifts parsing method to get regions information straight…
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
- 1 comment
#22 - Fabio's refact
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
- 1 comment
#21 - Merge table refac
Pull Request -
State: closed - Opened by biomadeira about 8 years ago
#20 - check_sequence uniprot and ensembl variants
Issue -
State: open - Opened by tbrittoborges about 8 years ago
#19 - merge_table_refac
Pull Request -
State: closed - Opened by tbrittoborges over 8 years ago
- 1 comment
#18 - Merge table refac
Pull Request -
State: closed - Opened by tbrittoborges over 8 years ago
- 1 comment
#17 - Design decision in _fetch_uniprot_variants
Issue -
State: open - Opened by tbrittoborges over 8 years ago
Labels: question
#16 - Use coverage.py to detected dead functions
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
#15 - `select_uniprot_variants` cannot handle mismatches with canonical transcript for a given UniProt
Issue -
State: open - Opened by stuartmac over 8 years ago
- 4 comments
#14 - Logging config
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
- 2 comments
#13 - Stuart
Pull Request -
State: closed - Opened by stuartmac over 8 years ago
- 1 comment
#12 - Let's merge branches a put it in production?
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
- 4 comments
#11 - Stuart
Pull Request -
State: closed - Opened by stuartmac over 8 years ago
#10 - Found a bug
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
- 3 comments
Labels: Label1
#9 - Found a bug3
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
Labels: Label2, asdasd
#8 - Found a bug2
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
Labels: Label2, asdasd
#7 - Found a bug
Issue -
State: closed - Opened by tbrittoborges over 8 years ago
Labels: Label1, Label2
#6 - Stuart
Pull Request -
State: closed - Opened by stuartmac over 8 years ago
- 2 comments
#5 - Stuart
Pull Request -
State: closed - Opened by stuartmac over 8 years ago
#4 - Stuart
Pull Request -
State: closed - Opened by stuartmac over 8 years ago
- 5 comments
#3 - Refactoring branch to master
Pull Request -
State: closed - Opened by biomadeira over 8 years ago
#2 - Stuart
Pull Request -
State: closed - Opened by stuartmac over 8 years ago
- 5 comments
#1 - ValueError: 3a5o|C Cif and DSSP files have diffent sequences.
Issue -
State: closed - Opened by tbrittoborges almost 9 years ago