Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / atomistic-machine-learning/schnetpack issues and pull requests

#659 - update versions for release

Pull Request - State: closed - Opened by stefaanhessmann 6 months ago

#658 - fixes bug and updates to new simpy verison

Pull Request - State: closed - Opened by stefaanhessmann 6 months ago

#657 - MPI error in lammps

Issue - State: open - Opened by wzy461143268 6 months ago - 2 comments

#656 - fixes bug in RemoveOffsets for intensive properties

Pull Request - State: closed - Opened by stefaanhessmann 6 months ago

#655 - load model and upgrade version in spkpredict

Pull Request - State: closed - Opened by jnsLs 6 months ago

#654 - upgrade dependencies to numpy 2

Pull Request - State: closed - Opened by stefaanhessmann 6 months ago

#653 - Sh/elementwise statistics

Pull Request - State: open - Opened by stefaanhessmann 6 months ago - 1 comment

#652 - Delete src/scripts/test_ase.py

Pull Request - State: closed - Opened by stefaanhessmann 6 months ago

#651 - md seed is initialized randomly if not specified

Pull Request - State: closed - Opened by jnsLs 6 months ago

#650 - first draft of MultipleTrainEpochsSampler

Pull Request - State: open - Opened by jnsLs 6 months ago

#649 - Jl/train set sampler

Pull Request - State: closed - Opened by jnsLs 6 months ago

#648 - added black workflow

Pull Request - State: closed - Opened by stefaanhessmann 7 months ago - 1 comment

#647 - Question about training/running on several GPU

Issue - State: closed - Opened by carlosbornes 7 months ago - 6 comments

#646 - drafting the load_model method with conversion between spk versions

Pull Request - State: closed - Opened by jnsLs 7 months ago

#645 - Jl/upgrade black

Pull Request - State: closed - Opened by jnsLs 7 months ago

#644 - Update spkdeploy

Pull Request - State: closed - Opened by jnsLs 8 months ago

#643 - setting required_derivatives to zero instead of empty list

Pull Request - State: closed - Opened by jnsLs 8 months ago

#642 - Question about transform.RemoveOffsets

Issue - State: closed - Opened by MasterLucas 8 months ago - 2 comments

#641 - Testing a trained model

Issue - State: closed - Opened by MasterLucas 8 months ago - 4 comments

#640 - test rtd

Pull Request - State: closed - Opened by jnsLs 8 months ago

#639 - Fluctuations in Training Loss Functions

Issue - State: closed - Opened by MasterLucas 8 months ago - 2 comments

#638 - batchwise optimizer is deprecated

Pull Request - State: closed - Opened by jnsLs 8 months ago

#637 - Model Testing

Issue - State: closed - Opened by MasterLucas 8 months ago - 4 comments

#636 - if no seed is specified, it is chosen randomly

Pull Request - State: closed - Opened by jnsLs 8 months ago

#635 - Atomic energies

Issue - State: closed - Opened by rothjo 9 months ago - 2 comments

#634 - restructure embeddings to avoid issues with torch jit

Pull Request - State: closed - Opened by Stefaanhess 9 months ago

#633 - Accessing properties in `.db` files, tutorials 1, 2.

Issue - State: closed - Opened by CalmScout 9 months ago - 3 comments

#632 - Issue using spkdeploy

Issue - State: closed - Opened by jap93 9 months ago - 3 comments
Labels: bug

#631 - SchNetPack on SMILES only input data

Issue - State: closed - Opened by CalmScout 10 months ago - 4 comments

#630 - spktrain not able to save model

Issue - State: closed - Opened by gulsumgudukbay 10 months ago - 4 comments

#629 - Data package

Pull Request - State: closed - Opened by romanpresniakov 10 months ago

#628 - Slow training on QM9

Issue - State: closed - Opened by CalmScout 10 months ago - 5 comments

#627 - add bernstein and physnet radial basis plus real spherical harmonics

Pull Request - State: closed - Opened by epens94 10 months ago

#626 - TypeError: data type 'str448' not understood

Issue - State: closed - Opened by Kailejiang 10 months ago - 2 comments

#625 - Forces with PBC

Issue - State: closed - Opened by owainbeynon 10 months ago - 7 comments

#624 - Prediction and target not the same shape

Issue - State: closed - Opened by sam-j-hall 10 months ago - 4 comments

#623 - Add tmqm dataset

Pull Request - State: closed - Opened by sgugler 10 months ago - 1 comment

#622 - Ep/qmml

Pull Request - State: closed - Opened by epens94 11 months ago

#621 - fixed device (cpu) in qm9 tutorial

Pull Request - State: closed - Opened by jnsLs 11 months ago

#620 - Training the model on QM9.

Issue - State: closed - Opened by renatofrazzato 11 months ago - 2 comments

#619 - Schnetpack version change: AtomsData

Issue - State: closed - Opened by librame17 11 months ago - 1 comment

#618 - PBC issue with LAMMPS interface (probably with fix)

Issue - State: open - Opened by andreas-er 11 months ago - 1 comment
Labels: bug

#617 - fix backwards compatibility and clean up

Pull Request - State: closed - Opened by Stefaanhess 11 months ago

#616 - Kk/qm7 x

Pull Request - State: closed - Opened by khaledkah 11 months ago - 1 comment

#614 - quick model save patch

Pull Request - State: closed - Opened by jnsLs 12 months ago

#613 - Problems during training

Issue - State: closed - Opened by MasterLucas 12 months ago - 4 comments

#612 - Data download + ingest + loader for QM7-X dataset

Pull Request - State: closed - Opened by twoPaiSquared 12 months ago

#611 - Adding the functionality to define matmul precision for pytorch in configs

Pull Request - State: closed - Opened by twoPaiSquared 12 months ago - 1 comment

#610 - added wandb logger

Pull Request - State: closed - Opened by jnsLs 12 months ago

#609 - Problem with the "Preparing your own data" tutorial

Issue - State: closed - Opened by mariofp77 12 months ago - 5 comments

#608 - Embedding spin multiplicity and charge based on SpookyNet implementation

Pull Request - State: closed - Opened by epens94 almost 1 year ago - 5 comments

#607 - Printing results using config.yaml

Issue - State: closed - Opened by odbadrakh about 1 year ago - 3 comments

#606 - random split is default

Pull Request - State: closed - Opened by jnsLs about 1 year ago

#605 - Jl/rmd17 train split fix

Pull Request - State: closed - Opened by jnsLs about 1 year ago

#604 - Ep/electronic embeeding

Pull Request - State: closed - Opened by epens94 about 1 year ago

#603 - Ep/electronic embeeding

Pull Request - State: closed - Opened by epens94 about 1 year ago

#602 - Ep/electronic embeeding

Pull Request - State: closed - Opened by epens94 about 1 year ago

#601 - Adjust learning rate layerwise

Issue - State: closed - Opened by ThorrenKirschbaum about 1 year ago - 2 comments

#599 - Unpin dependencies and cleanup

Pull Request - State: closed - Opened by Maltimore about 1 year ago

#597 - doc: put link to docs earlier in the readme, and add tests README

Pull Request - State: closed - Opened by Maltimore about 1 year ago

#596 - replace setup.py with pyproject.toml

Pull Request - State: closed - Opened by Maltimore about 1 year ago

#595 - [WIP] README: remove outdated or less important information

Pull Request - State: closed - Opened by Maltimore about 1 year ago

#594 - torch.testing: update deprecated assert_allclose

Pull Request - State: closed - Opened by Maltimore about 1 year ago

#593 - hydra: add _self_ to defaults list to avoid warning

Pull Request - State: closed - Opened by Maltimore about 1 year ago

#592 - Error in qm9 tutorial

Issue - State: closed - Opened by JonathanSchmidt1 about 1 year ago - 1 comment

#591 - Question on config file

Issue - State: closed - Opened by nitbha007 about 1 year ago - 4 comments

#590 - Doubt about schnetpack.environment

Issue - State: closed - Opened by dondavidsb about 1 year ago - 1 comment

#589 - How to train the Schnet model using all the data without using a validation set

Issue - State: closed - Opened by yuchanpei about 1 year ago - 2 comments

#588 - requirements.txt is linked to setup.py

Pull Request - State: closed - Opened by jnsLs about 1 year ago - 2 comments

#587 - qm9 needs remove_uncharacterized=False now?

Issue - State: closed - Opened by Maltimore over 1 year ago - 3 comments

#586 - doc: Readme: various minor fixes

Pull Request - State: closed - Opened by Maltimore over 1 year ago

#585 - requirements: add pytest-benchmark

Pull Request - State: closed - Opened by Maltimore over 1 year ago

#584 - fix typo: propery -> property

Pull Request - State: closed - Opened by Maltimore over 1 year ago

#583 - ISO17 Loader does not consider parameter for num_train/test/val

Issue - State: closed - Opened by DevinTDHa over 1 year ago - 2 comments

#582 - fix ISO17 database

Pull Request - State: closed - Opened by Stefaanhess over 1 year ago

#581 - ISO17 data load bug

Issue - State: closed - Opened by C-K-Loan over 1 year ago - 2 comments

#580 - all tutorials on cpu

Pull Request - State: closed - Opened by jnsLs over 1 year ago

#579 - windows issue with index tensors

Pull Request - State: closed - Opened by jnsLs over 1 year ago

#578 - Update data.rst

Pull Request - State: closed - Opened by Stefaanhess over 1 year ago

#577 - invalid literal for int() with base 10: '*'

Issue - State: closed - Opened by Rom4e6 over 1 year ago - 7 comments

#576 - IndexError: tensors used as indices must be long, byte or bool tensors

Issue - State: closed - Opened by luciarap over 1 year ago - 12 comments

#575 - Update getstarted.rst

Pull Request - State: closed - Opened by jnsLs over 1 year ago

#574 - Update README.md

Pull Request - State: closed - Opened by jnsLs over 1 year ago

#573 - Update setup.py

Pull Request - State: closed - Opened by Stefaanhess over 1 year ago

#572 - Update setup.py

Pull Request - State: closed - Opened by Stefaanhess over 1 year ago

#571 - ASENeighborList in cuda

Issue - State: closed - Opened by heyfavour over 1 year ago - 1 comment

#570 - Conda installation problem

Issue - State: closed - Opened by lizsalmon over 1 year ago - 3 comments

#569 - Extracting the atomic embeddings for a molecule after a model is trained

Issue - State: closed - Opened by jindal92 over 1 year ago - 7 comments

#568 - Question about the target name

Issue - State: closed - Opened by MetaEnigma97 over 1 year ago - 5 comments

#567 - Question about config and model representation

Issue - State: closed - Opened by nitbha007 over 1 year ago - 15 comments

#566 - Update requirements.txt

Pull Request - State: closed - Opened by jnsLs over 1 year ago

#564 - data dimensions are updated in materials tutorial

Pull Request - State: closed - Opened by jnsLs over 1 year ago

#563 - Mismatched tensor sizes:

Issue - State: closed - Opened by ignaciomigliaro over 1 year ago - 4 comments

#562 - updated tutorial 1

Pull Request - State: closed - Opened by Stefaanhess over 1 year ago

#561 - Support to MPS Framework

Issue - State: closed - Opened by viniavila over 1 year ago - 4 comments

#560 - updated pytorch-lightning requirement

Pull Request - State: closed - Opened by jnsLs over 1 year ago