Ecosyste.ms: Issues

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GitHub / asmagen/robustsinglecell issues and pull requests

#37 - Getting errors from the tutorial.

Issue - State: open - Opened by ssun12 over 3 years ago - 2 comments

#34 - Do not import all of `GGally`

Pull Request - State: closed - Opened by schloerke over 4 years ago - 1 comment

#33 - Issue 12

Issue - State: closed - Opened by asmagen over 4 years ago

#32 - Issue 1211

Issue - State: closed - Opened by asmagen over 4 years ago

#31 - load.cluster.names not exported

Issue - State: open - Opened by asmagen over 5 years ago

#30 - Issue with read.data

Issue - State: open - Opened by asmagen over 5 years ago - 4 comments
Labels: bug

#29 - Pdf canvas size is not adjusted properly

Issue - State: open - Opened by asmagen over 5 years ago
Labels: enhancement

#28 - Create LICENSE

Pull Request - State: closed - Opened by asmagen over 5 years ago

#27 - Filter data issue

Issue - State: open - Opened by asmagen over 5 years ago

#26 - Outputs to user interface

Issue - State: open - Opened by asmagen over 5 years ago
Labels: bug

#25 - Figure margins errors

Issue - State: open - Opened by asmagen over 5 years ago

#24 - PCA gene signature activation regress functionality bug

Issue - State: closed - Opened by asmagen over 5 years ago
Labels: bug

#23 - read.preclustered.datasets: bug with the experiments variable

Issue - State: closed - Opened by asmagen over 5 years ago - 1 comment
Labels: bug

#22 - cluster.analysis output missing

Issue - State: closed - Opened by asmagen over 5 years ago

#21 - Rerunning read.precluster.data changed attribute size

Issue - State: closed - Opened by Mamie over 5 years ago

#20 - Waiting for tSNE slurm output in summarize

Issue - State: closed - Opened by asmagen over 5 years ago - 1 comment

#19 - union.genes.filter call in read.preclustered.datasets

Issue - State: closed - Opened by asmagen over 5 years ago - 1 comment
Labels: bug

#18 - margins are hard coded in visualize.cluster.cors.heatmaps

Issue - State: closed - Opened by asmagen over 5 years ago - 4 comments

#16 - check_not_slurm is called unnecessarily in function that don't use rslurm

Issue - State: closed - Opened by asmagen over 5 years ago - 3 comments

#15 - Bug in read.preclustered.datasets

Issue - State: closed - Opened by asmagen over 5 years ago - 1 comment
Labels: bug

#14 - compare.cluster.similarity undefined

Issue - State: closed - Opened by asmagen over 5 years ago - 3 comments

#13 - run_tSNE fails on big datasets

Issue - State: closed - Opened by asmagen over 5 years ago - 3 comments

#12 - plot.simple.heatmap not exported

Issue - State: closed - Opened by asmagen over 5 years ago - 3 comments

#10 - filter.cluster.data/filter.data functions not exported

Issue - State: closed - Opened by asmagen over 5 years ago - 1 comment

#9 - check rslurm function prints 'SLURM not detected' even when slum is detected

Issue - State: closed - Opened by asmagen over 5 years ago - 3 comments
Labels: bug

#8 - Clean up open file connection after function throw an error

Issue - State: closed - Opened by Mamie over 5 years ago - 1 comment
Labels: bug

#7 - Failing to read data after changing input parameter

Issue - State: closed - Opened by asmagen over 5 years ago - 1 comment
Labels: bug

#5 - Added new figures to lcmv.rmd and revised the figure name annotations

Pull Request - State: closed - Opened by asmagen over 5 years ago

#4 - Create LICENSE

Pull Request - State: closed - Opened by asmagen over 5 years ago

#3 - Add marker visualizations

Issue - State: closed - Opened by asmagen over 5 years ago - 2 comments
Labels: enhancement

#2 - GitHub.io

Issue - State: closed - Opened by asmagen almost 6 years ago - 1 comment
Labels: good first issue

#1 - Add marker discovery functionality as described in original publication.

Issue - State: closed - Opened by asmagen almost 6 years ago - 2 comments
Labels: enhancement