Ecosyste.ms: Issues

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GitHub / aschampion/diluvian issues and pull requests

#55 - Bump wheel from 0.29.0 to 0.38.1 in /requirements

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#54 - Bump pillow from 4.0.0 to 9.3.0 in /requirements

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#53 - Bump tensorflow from 1.8.0 to 2.9.3 in /requirements

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#52 - Bump tensorflow-gpu from 1.2.1 to 2.9.3 in /requirements

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#51 - Bump numpy from 1.14.3 to 1.22.0 in /requirements

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#50 - Bump tensorflow from 1.8.0 to 2.7.2 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#49 - Bump tensorflow-gpu from 1.2.1 to 2.7.2 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#48 - Bump tensorflow from 1.8.0 to 2.6.4 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#47 - Bump tensorflow-gpu from 1.2.1 to 2.6.4 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#46 - Bump pillow from 4.0.0 to 9.0.1 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#45 - Bump tensorflow from 1.8.0 to 2.5.3 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#44 - Bump tensorflow-gpu from 1.2.1 to 2.5.3 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#43 - Bump pillow from 4.0.0 to 9.0.0 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#42 - Bump pip from 9.0.1 to 21.1 in /requirements

Pull Request - State: open - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#41 - Bump pillow from 4.0.0 to 8.3.2 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago - 1 comment
Labels: dependencies

#40 - Bump tensorflow from 1.8.0 to 2.5.1 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#39 - Bump tensorflow-gpu from 1.2.1 to 2.5.1 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#38 - Bump pip from 9.0.1 to 19.2 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#37 - Bump pillow from 4.0.0 to 8.2.0 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#36 - Bump tensorflow from 1.8.0 to 2.5.0 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#35 - Bump pyyaml from 3.12 to 5.4 in /requirements

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#34 - Bump pillow from 4.0.0 to 8.1.1 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#33 - Bump tensorflow from 1.8.0 to 2.3.1 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#32 - Bump tensorflow-gpu from 1.2.1 to 2.3.1 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#31 - Bump cryptography from 1.7 to 3.2 in /requirements

Pull Request - State: open - Opened by dependabot[bot] about 4 years ago
Labels: dependencies

#30 - Bump tensorflow from 1.8.0 to 1.15.4 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#29 - Bump tensorflow-gpu from 1.2.1 to 1.15.4 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#28 - Bump tensorflow from 1.8.0 to 1.15.2 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#27 - Bump tensorflow-gpu from 1.2.1 to 1.15.2 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#26 - Bump tensorflow from 1.8.0 to 1.15.0 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#25 - Bump tensorflow-gpu from 1.2.1 to 1.15.0 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#24 - Bump pillow from 4.0.0 to 6.2.0 in /requirements

Pull Request - State: closed - Opened by dependabot[bot] about 5 years ago - 1 comment
Labels: dependencies

#23 - setup.py doesn't work

Issue - State: open - Opened by MatthewBM over 5 years ago

#22 - Add python3.7 to travis and tox.

Pull Request - State: open - Opened by pattonw over 5 years ago

#21 - N5Volume

Pull Request - State: closed - Opened by pattonw over 5 years ago - 6 comments

#20 - ImageStackVolumes

Pull Request - State: closed - Opened by pattonw almost 6 years ago

#19 - Add support for a coordinate channel input

Pull Request - State: open - Opened by pattonw almost 6 years ago

#18 - Image stacks

Pull Request - State: closed - Opened by pattonw almost 6 years ago

#17 - Coordinate transforms:

Pull Request - State: closed - Opened by pattonw almost 6 years ago - 3 comments

#16 - Downsampling:

Pull Request - State: closed - Opened by pattonw almost 6 years ago - 1 comment

#15 - UNet should downsample dimensions to nearest isotropy

Issue - State: closed - Opened by aschampion over 6 years ago - 1 comment
Labels: enhancement

#14 - 'pip install diluvian' is not working

Issue - State: closed - Opened by mimi1942 almost 7 years ago - 3 comments

#13 - Training and prediction of the "CREMI" data set. PART 2

Issue - State: open - Opened by ravil-mobile about 7 years ago - 5 comments

#12 - Training and prediction of the "CREMI" data set. PART 1

Issue - State: closed - Opened by ravil-mobile about 7 years ago - 1 comment

#11 - fill_subvolume_with_model overwrites CUDA_VISIBLE_DEVICES

Issue - State: closed - Opened by braingram over 7 years ago - 1 comment
Labels: bug

#10 - Python3

Pull Request - State: closed - Opened by mlnichols over 7 years ago - 1 comment

#9 - Reimplement a transposed convolution for UNet upscaling

Issue - State: closed - Opened by aschampion over 7 years ago
Labels: bug

#8 - Multi GPU fn's should optionally take list of devices instead of GPU count

Issue - State: open - Opened by aschampion over 7 years ago
Labels: enhancement

#7 - Optional noise/dropout in mask input channel for robustness training

Issue - State: open - Opened by aschampion over 7 years ago
Labels: enhancement

#6 - Support dilated conv layers

Issue - State: open - Opened by aschampion over 7 years ago
Labels: enhancement

#5 - Dense segmentation should fill in parallel

Issue - State: closed - Opened by aschampion over 7 years ago
Labels: enhancement

#4 - Coalesce adjacent partitions

Issue - State: open - Opened by aschampion over 7 years ago
Labels: enhancement

#3 - Batches should optionally be drawn from a single subvolume generator

Issue - State: open - Opened by aschampion over 7 years ago
Labels: enhancement

#1 - Save labeled bodies to HDF5 for inspection (single region sparse)

Issue - State: open - Opened by aschampion over 7 years ago
Labels: enhancement