Ecosyste.ms: Issues

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GitHub / arq5x/scurgen issues and pull requests

#34 - precomputed.npz

Issue - State: open - Opened by daler almost 12 years ago - 1 comment

#33 - GUI updates, bigWig support, docs, and more

Pull Request - State: closed - Opened by daler almost 12 years ago - 6 comments

#32 - Yet another GUI refactor

Pull Request - State: closed - Opened by daler about 12 years ago - 7 comments

#31 - How to interpret chrom="genome"

Issue - State: open - Opened by daler about 12 years ago - 2 comments

#30 - Add lower-order outlines

Issue - State: open - Opened by daler about 12 years ago - 2 comments

#29 - Reconcile similarities/differences with HilbertVis

Issue - State: closed - Opened by daler about 12 years ago

#28 - Make a grid of plots (one per chrom) for whole-genome plots

Issue - State: open - Opened by arq5x about 12 years ago - 2 comments

#27 - Toggle to include/exclude data set from GUI

Issue - State: closed - Opened by arq5x about 12 years ago - 2 comments

#26 - combine "submodule"

Issue - State: open - Opened by arq5x about 12 years ago

#25 - track plotting

Issue - State: open - Opened by daler about 12 years ago

#24 - Which GUI framework to use

Issue - State: open - Opened by daler about 12 years ago - 4 comments

#23 - Use common base class for GUI and static images

Issue - State: open - Opened by arq5x about 12 years ago - 1 comment

#22 - GUI refactor

Pull Request - State: closed - Opened by daler about 12 years ago

#21 - Color picker.

Issue - State: open - Opened by arq5x about 12 years ago

#20 - Saving image from GUI should omit the controls

Issue - State: open - Opened by arq5x about 12 years ago - 1 comment

#19 - m_dim or matrix_dim?

Issue - State: closed - Opened by daler about 12 years ago - 1 comment

#18 - text box showing corresponding genomic coords of mouse position in matrix

Pull Request - State: closed - Opened by daler about 12 years ago

#17 - Incorrect chrom coordinates when GUI zooming

Issue - State: closed - Opened by arq5x about 12 years ago - 2 comments

#16 - Generalize HilbertGUI

Issue - State: open - Opened by daler about 12 years ago - 2 comments

#15 - proto-GUI, masking, and tests

Pull Request - State: closed - Opened by daler about 12 years ago - 3 comments

#14 - d2xy and xy2d inconsistent

Issue - State: closed - Opened by daler about 12 years ago - 2 comments

#13 - chromosome ordering for "genome" mode

Issue - State: open - Opened by arq5x about 12 years ago

#12 - Refactor, tests, and merge with master

Pull Request - State: closed - Opened by daler about 12 years ago - 1 comment

#11 - "random" module

Issue - State: open - Opened by arq5x about 12 years ago

#10 - Rainbow plots

Issue - State: open - Opened by arq5x about 12 years ago

#9 - Support chrom ranges

Issue - State: closed - Opened by arq5x about 12 years ago

#8 - add a "legend" module as a stop-gap until GUI is done.

Issue - State: closed - Opened by arq5x about 12 years ago - 1 comment

#7 - add a ratio module

Issue - State: open - Opened by arq5x about 12 years ago

#6 - add a subtract module

Issue - State: open - Opened by arq5x about 12 years ago

#5 - Find a good way to plot the "merge" of multiple datasets

Issue - State: open - Opened by arq5x about 12 years ago

#4 - Create setup.py for installation, etc.

Issue - State: closed - Opened by arq5x about 12 years ago

#3 - BAM support.

Issue - State: closed - Opened by arq5x about 12 years ago - 1 comment

#2 - Option to plot genome-wide data

Issue - State: closed - Opened by arq5x about 12 years ago - 1 comment

#1 - Zero values in matrix should be white.

Issue - State: closed - Opened by arq5x about 12 years ago