Ecosyste.ms: Issues
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GitHub / aristoteleo/dynast-release issues and pull requests
#22 - New feature: allow user to collapse R1 and R2 in the same UMI group to separate consensus reads
Pull Request -
State: open - Opened by Qirong-Lin 29 days ago
- 1 comment
#21 - dynast count very slow - may not be parallelized?
Issue -
State: open - Opened by wgao688 7 months ago
#20 - dynast count --conversion
Issue -
State: open - Opened by L1angyan 12 months ago
#19 - Correct alpha_c in docs
Pull Request -
State: open - Opened by Jiayi-Fan over 1 year ago
#18 - dynast --list option not suitable
Issue -
State: open - Opened by Fra-Mante over 1 year ago
- 1 comment
#17 - dynast count error:forward_strand = df_counts['GX'].map(lambda gx: gene_infos[gx]['strand']) == '-' KeyError: '-'
Issue -
State: open - Opened by mingjianPeng almost 2 years ago
#16 - Recruiting Python Programmers to Develop Predictive Single Cell Spatiotemporal Analysis Toolkit
Issue -
State: closed - Opened by Xiaojieqiu over 2 years ago
- 1 comment
Labels: Stale
#15 - v1.0.1
Pull Request -
State: closed - Opened by Lioscro over 2 years ago
#14 - Consensus.bam lost gene-tag after completion
Issue -
State: closed - Opened by mhagemann86 over 2 years ago
- 2 comments
#13 - Alpha correction
Pull Request -
State: closed - Opened by Lioscro over 2 years ago
#12 - v1.0.0
Pull Request -
State: closed - Opened by Lioscro over 2 years ago
#11 - Motivation for using consensus
Issue -
State: closed - Opened by rorymaizels over 2 years ago
- 3 comments
Labels: Stale
#10 - merge devel into main
Pull Request -
State: closed - Opened by Lioscro almost 3 years ago
#9 - Bug in 'estimate' when p_e is taken from control
Issue -
State: closed - Opened by rorymaizels almost 3 years ago
- 4 comments
Labels: Stale
#8 - support 10xv3
Pull Request -
State: closed - Opened by Lioscro almost 3 years ago
#7 - monkeypatch for python 3.7
Pull Request -
State: closed - Opened by Lioscro about 3 years ago
#6 - Dynast count error:
Issue -
State: closed - Opened by mav-mit over 3 years ago
- 7 comments
Labels: Stale
#5 - merge devel into main
Pull Request -
State: closed - Opened by Lioscro over 3 years ago
#4 - Dynast count BamError: Some paired reads do not have mates
Issue -
State: closed - Opened by julianalbers over 3 years ago
- 3 comments
Labels: Stale
#3 - Align: not enough memory for BAM sorting potentially due to BinsN too high
Issue -
State: closed - Opened by cpcouturier over 3 years ago
- 5 comments
Labels: Stale
#2 - dynast estimate: behavior for genes for which estimation is skipped and --reads argument
Issue -
State: closed - Opened by jmartinrufino almost 4 years ago
- 3 comments
Labels: Stale
#1 - Exception on dynast estimate - cell barcode names
Issue -
State: closed - Opened by jmartinrufino almost 4 years ago
- 4 comments
Labels: Stale