Ecosyste.ms: Issues

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GitHub / arendsee/fagin issues and pull requests

#23 - more instruction about how to run fagin?

Issue - State: open - Opened by hsinyenwu almost 4 years ago - 3 comments

#22 - error when reading synteny map

Issue - State: open - Opened by lijing28101 over 5 years ago - 2 comments

#21 - Error maybe for loading gene model

Issue - State: open - Opened by lijing28101 over 5 years ago

#20 - try to use unannotated ORF to run fagin

Issue - State: open - Opened by lijing28101 over 7 years ago - 8 comments
Labels: enhancement

#19 - bug in 2d_get_all_orfs.sh

Issue - State: closed - Opened by lijing28101 over 7 years ago - 1 comment

#18 - How to make a gene_list (genes that will be analyzed)

Issue - State: open - Opened by urmi-21 over 7 years ago - 2 comments
Labels: bug, enhancement, help wanted

#17 - Failed using different orphan list.

Issue - State: open - Opened by lijing28101 over 7 years ago - 3 comments
Labels: bug

#16 - Some questions about the output

Issue - State: closed - Opened by lijing28101 over 7 years ago - 2 comments
Labels: enhancement

#15 - Overlapping x-axis labels on the species/GC content plot

Issue - State: closed - Opened by lijing28101 over 7 years ago - 1 comment
Labels: enhancement

#14 - Accessing `fagin` results is confusing

Issue - State: closed - Opened by evewurtele over 7 years ago - 3 comments
Labels: enhancement

#13 - split up categories

Issue - State: closed - Opened by evewurtele over 7 years ago - 1 comment

#12 - Unhandled warnings for infinite values in log plots

Issue - State: closed - Opened by lijing28101 over 7 years ago - 2 comments

#11 - Missing caption

Issue - State: closed - Opened by lijing28101 over 7 years ago - 1 comment
Labels: enhancement

#10 - "Error in setNames" message when nstrings=NULL

Issue - State: closed - Opened by lijing28101 over 7 years ago - 1 comment
Labels: bug

#9 - subscript contains invalid rownames

Issue - State: closed - Opened by lijing28101 over 7 years ago - 1 comment
Labels: bug

#8 - Warning messages for protein name

Issue - State: closed - Opened by lijing28101 over 7 years ago - 3 comments

#7 - lack of fullpage.sty

Issue - State: closed - Opened by lijing28101 over 7 years ago - 4 comments

#5 - Object 'prot2allorf.cutoff' not found

Issue - State: closed - Opened by arendsee over 7 years ago - 20 comments

#4 - Error when runnning make deepclean

Issue - State: closed - Opened by lijing28101 over 7 years ago - 8 comments

#3 - Bun in 4_get-search-intervals.sh

Issue - State: closed - Opened by lijing28101 over 7 years ago - 5 comments
Labels: bug

#2 - New updates?

Issue - State: closed - Opened by urmi-21 over 7 years ago - 1 comment

#1 - gff format problem

Issue - State: closed - Opened by lijing28101 about 8 years ago - 3 comments